Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.09□□□□□ -1.43
Traf1P39428 AC137117.1-201ENSMUST00000226912 441 ntBASIC6.09□□□□□ -1.43
Traf1P39428 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Traf1P39428 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Traf1P39428 Gm24706-201ENSMUST00000082806 137 ntBASIC6.09□□□□□ -1.43
Traf1P39428 Gm22741-201ENSMUST00000083438 165 ntBASIC6.09□□□□□ -1.43
Traf1P39428 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.09□□□□□ -1.43
Traf1P39428 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.09□□□□□ -1.43
Traf1P39428 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Traf1P39428 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Traf1P39428 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Traf1P39428 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Traf1P39428 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Traf1P39428 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Traf1P39428 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC6.08□□□□□ -1.44
Traf1P39428 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Traf1P39428 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Traf1P39428 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Traf1P39428 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Traf1P39428 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Traf1P39428 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Traf1P39428 Gm16420-201ENSMUST00000120258 856 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Gm15780-201ENSMUST00000121283 935 ntBASIC6.08□□□□□ -1.44
Traf1P39428 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Gm23993-201ENSMUST00000157478 144 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Gm25383-201ENSMUST00000157810 144 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Gm26355-201ENSMUST00000158220 105 ntBASIC6.08□□□□□ -1.44
Traf1P39428 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Traf1P39428 Gm26993-201ENSMUST00000182766 789 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Gm28660-201ENSMUST00000186496 253 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Gm42458-201ENSMUST00000201914 369 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Traf1P39428 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Traf1P39428 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Traf1P39428 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Traf1P39428 Olfr654-201ENSMUST00000098173 1155 ntBASIC6.08□□□□□ -1.44
Traf1P39428 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Traf1P39428 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Traf1P39428 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Traf1P39428 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Traf1P39428 Gm45324-201ENSMUST00000211193 5638 ntBASIC6.07□□□□□ -1.44
Traf1P39428 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.07□□□□□ -1.44
Traf1P39428 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Traf1P39428 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Gm11912-201ENSMUST00000117235 264 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Traf1P39428 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.07□□□□□ -1.44
Traf1P39428 n-R5s98-201ENSMUST00000122549 119 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Gm16345-201ENSMUST00000146065 158 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Gm23855-201ENSMUST00000158377 135 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Gm18728-201ENSMUST00000186155 753 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Gm2053-201ENSMUST00000195671 631 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.07□□□□□ -1.44
Traf1P39428 Olfr151-202ENSMUST00000221099 929 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Traf1P39428 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Traf1P39428 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Traf1P39428 Gm24763-201ENSMUST00000083688 190 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Traf1P39428 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Traf1P39428 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.07□□□□□ -1.44
Traf1P39428 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Traf1P39428 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Traf1P39428 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Traf1P39428 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Traf1P39428 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Traf1P39428 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms