Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm6632-201ENSMUST00000168425 954 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Sdc1P18828 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm16378-201ENSMUST00000179168 342 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm27679-201ENSMUST00000184612 84 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm28353-201ENSMUST00000186482 570 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm28533-201ENSMUST00000186741 570 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm29234-201ENSMUST00000187452 1262 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm38029-201ENSMUST00000192669 2090 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm412-201ENSMUST00000193360 948 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Ighv1-30-201ENSMUST00000194082 349 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm18952-201ENSMUST00000194471 846 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.08□□□□□ -1.76
Sdc1P18828 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 AC154806.3-201ENSMUST00000227376 439 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Sdc1P18828 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm23407-201ENSMUST00000082538 91 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.07□□□□□ -1.76
Sdc1P18828 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Sdc1P18828 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Sdc1P18828 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Sdc1P18828 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Sdc1P18828 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Sdc1P18828 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Sdc1P18828 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Sdc1P18828 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm25877-201ENSMUST00000104326 129 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm15779-201ENSMUST00000117470 412 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm25106-201ENSMUST00000122672 134 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 n-R5s19-201ENSMUST00000122793 120 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm16330-201ENSMUST00000128324 297 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.07□□□□□ -1.76
Sdc1P18828 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm24860-201ENSMUST00000158457 276 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Sdc1P18828 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC4.07□□□□□ -1.76
Sdc1P18828 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm22642-201ENSMUST00000175352 252 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm24303-201ENSMUST00000178237 126 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Sdc1P18828 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm37837-201ENSMUST00000191743 604 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm37676-201ENSMUST00000195496 507 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm43078-201ENSMUST00000197222 168 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm43825-201ENSMUST00000199650 734 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm4321-201ENSMUST00000200520 442 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm2602-201ENSMUST00000202112 571 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC4.07□□□□□ -1.76
Sdc1P18828 Gm43925-201ENSMUST00000203498 206 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC4.07□□□□□ -1.76
Sdc1P18828 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC4.07□□□□□ -1.76
Sdc1P18828 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 AC135086.1-201ENSMUST00000228621 817 ntBASIC4.07□□□□□ -1.76
Sdc1P18828 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms