Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm6075-201ENSMUST00000186816 486 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm37444-201ENSMUST00000193605 439 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm37774-201ENSMUST00000194401 245 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm43276-201ENSMUST00000199712 364 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm6520-201ENSMUST00000200636 410 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm44234-201ENSMUST00000204246 900 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC4.29□□□□□ -1.72
Cdx1P18111 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 CT033778.1-201ENSMUST00000224767 767 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Mir133b-201ENSMUST00000083546 119 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Cdx1P18111 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Cdx1P18111 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Cdx1P18111 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Cdx1P18111 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Cdx1P18111 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Cdx1P18111 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms