Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col1a1P11087 AC121804.1-201ENSMUST00000221016 394 ntBASIC5.82□□□□□ -1.48
Col1a1P11087 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col1a1P11087 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col1a1P11087 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Col1a1P11087 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.82□□□□□ -1.48
Col1a1P11087 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Col1a1P11087 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col1a1P11087 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col1a1P11087 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col1a1P11087 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col1a1P11087 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.81□□□□□ -1.48
Col1a1P11087 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col1a1P11087 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col1a1P11087 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Gm23014-201ENSMUST00000104144 130 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col1a1P11087 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.81□□□□□ -1.48
Col1a1P11087 Gm11914-201ENSMUST00000117094 507 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Gm14753-201ENSMUST00000118503 246 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Gm14560-201ENSMUST00000118672 375 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.81□□□□□ -1.48
Col1a1P11087 Gm14037-201ENSMUST00000120576 313 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Gm13232-201ENSMUST00000121816 632 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Gm15075-201ENSMUST00000122187 477 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Gm22367-201ENSMUST00000178930 132 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.81□□□□□ -1.48
Col1a1P11087 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col1a1P11087 Gm45007-201ENSMUST00000206237 366 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col1a1P11087 Gm8137-201ENSMUST00000218997 463 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Gm31931-201ENSMUST00000219666 222 ntBASIC5.81□□□□□ -1.48
Col1a1P11087 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col1a1P11087 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col1a1P11087 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.81□□□□□ -1.48
Col1a1P11087 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col1a1P11087 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col1a1P11087 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col1a1P11087 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col1a1P11087 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col1a1P11087 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col1a1P11087 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Col1a1P11087 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.8□□□□□ -1.48
Col1a1P11087 Gm14854-201ENSMUST00000117758 841 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.8□□□□□ -1.48
Col1a1P11087 Gm45070-201ENSMUST00000208100 246 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
Col1a1P11087 Gm11360-201ENSMUST00000221898 262 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.8□□□□□ -1.48
Col1a1P11087 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Gm37254-201ENSMUST00000193542 3901 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col1a1P11087 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col1a1P11087 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.8□□□□□ -1.48
Col1a1P11087 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col1a1P11087 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Col1a1P11087 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col1a1P11087 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col1a1P11087 Mir761-201ENSMUST00000103245 76 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Gm15752-201ENSMUST00000117427 394 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Gm7312-201ENSMUST00000118798 469 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Gm22613-201ENSMUST00000122679 292 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm22326-201ENSMUST00000158897 351 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col1a1P11087 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.79□□□□□ -1.48
Col1a1P11087 Gm43580-201ENSMUST00000202892 284 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Gm43968-201ENSMUST00000203388 389 ntBASIC5.79□□□□□ -1.48
Col1a1P11087 Gm18537-201ENSMUST00000205709 989 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms