Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm42763-201ENSMUST00000199595 2087 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm45483-201ENSMUST00000209845 1682 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Mbnl2-203ENSMUST00000226800 3328 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm12346-201ENSMUST00000121455 2255 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 CT025535.2-201ENSMUST00000228572 7441 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm22438-201ENSMUST00000104049 132 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm14125-201ENSMUST00000113442 680 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm14930-201ENSMUST00000118864 652 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm12710-201ENSMUST00000119011 216 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm14631-201ENSMUST00000119067 594 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm5942-201ENSMUST00000120046 439 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm23206-201ENSMUST00000122720 184 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm26046-201ENSMUST00000157312 166 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm23350-201ENSMUST00000158429 103 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm25365-201ENSMUST00000158852 121 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm17062-201ENSMUST00000166987 461 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm5272-201ENSMUST00000182730 982 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Mir8120-201ENSMUST00000185035 139 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm5261-201ENSMUST00000185860 713 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm8182-201ENSMUST00000197863 769 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm8667-201ENSMUST00000211112 449 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm8275-201ENSMUST00000219732 424 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm5841-201ENSMUST00000195307 2177 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm45112-201ENSMUST00000208576 5125 ntBASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Hoxd3P09027 Gm44769-201ENSMUST00000206120 2809 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 AC158938.1-201ENSMUST00000225372 6720 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC5.56□□□□□ -1.52
Hoxd3P09027 AC105407.2-205ENSMUST00000224680 2733 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm24869-201ENSMUST00000104072 128 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm15211-201ENSMUST00000118932 528 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm13900-201ENSMUST00000119402 498 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm16074-201ENSMUST00000119524 444 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm13735-201ENSMUST00000120217 670 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm12535-201ENSMUST00000121025 484 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm2709-201ENSMUST00000142979 350 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm25435-201ENSMUST00000158277 267 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms