Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Cldn5O54942 Gm15828-201ENSMUST00000119911 522 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Gm9208-201ENSMUST00000120468 948 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Gm13808-201ENSMUST00000121353 184 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.33□□□□□ -1.56
Cldn5O54942 Gm24477-201ENSMUST00000157438 103 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Gm23965-201ENSMUST00000157969 142 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 Gm28468-201ENSMUST00000188536 615 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.33□□□□□ -1.56
Cldn5O54942 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.33□□□□□ -1.56
Cldn5O54942 Gm18985-201ENSMUST00000196472 1079 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 Gm4574-201ENSMUST00000207804 542 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Gm34272-201ENSMUST00000208886 253 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC5.33□□□□□ -1.56
Cldn5O54942 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cldn5O54942 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cldn5O54942 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cldn5O54942 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cldn5O54942 Mir134-201ENSMUST00000083492 71 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.33□□□□□ -1.56
Cldn5O54942 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Cldn5O54942 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cldn5O54942 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.33□□□□□ -1.56
Cldn5O54942 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cldn5O54942 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.33□□□□□ -1.56
Cldn5O54942 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cldn5O54942 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.33□□□□□ -1.56
Cldn5O54942 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cldn5O54942 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cldn5O54942 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cldn5O54942 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Cldn5O54942 AC163296.2-201ENSMUST00000220177 1315 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm4910-201ENSMUST00000119605 366 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm4914-201ENSMUST00000119757 459 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm12685-201ENSMUST00000121702 214 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm13487-201ENSMUST00000122240 864 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm25179-201ENSMUST00000122632 128 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm17086-201ENSMUST00000171346 484 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm26731-201ENSMUST00000180683 543 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cldn5O54942 Gm28976-201ENSMUST00000188070 144 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm4290-201ENSMUST00000206897 814 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm18127-201ENSMUST00000208479 725 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm19201-201ENSMUST00000210127 778 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC5.32□□□□□ -1.56
Cldn5O54942 Gm8288-201ENSMUST00000223406 593 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 AC131117.2-203ENSMUST00000225886 950 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cldn5O54942 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Cldn5O54942 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.32□□□□□ -1.56
Cldn5O54942 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cldn5O54942 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Cldn5O54942 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cldn5O54942 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cldn5O54942 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cldn5O54942 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cldn5O54942 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Cldn5O54942 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Cldn5O54942 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cldn5O54942 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Cldn5O54942 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Cldn5O54942 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Cldn5O54942 Gm12641-201ENSMUST00000117874 985 ntBASIC5.31□□□□□ -1.56
Cldn5O54942 Gm12807-201ENSMUST00000121546 962 ntBASIC5.31□□□□□ -1.56
Cldn5O54942 Gm16254-201ENSMUST00000131528 730 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 125.6 ms