Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm45854-201ENSMUST00000211857 3488 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm18954-201ENSMUST00000222200 1792 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm21037-201ENSMUST00000209086 2608 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm42661-201ENSMUST00000202364 1442 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm42561-201ENSMUST00000202563 1442 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm11781-201ENSMUST00000118328 472 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm15233-201ENSMUST00000118747 400 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm11631-201ENSMUST00000119220 156 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm11584-201ENSMUST00000120636 325 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm11341-201ENSMUST00000122316 447 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 n-R5s24-201ENSMUST00000122518 117 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm22601-201ENSMUST00000157595 250 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm24690-201ENSMUST00000157759 97 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm6472-201ENSMUST00000178147 651 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm2539-203ENSMUST00000181352 746 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm18864-201ENSMUST00000194518 1051 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm44360-201ENSMUST00000200081 82 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm8999-201ENSMUST00000204951 969 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm17988-201ENSMUST00000208796 535 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 AC131720.3-201ENSMUST00000219113 275 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
Hmgb3O54879 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Hmgb3O54879 AC122317.3-201ENSMUST00000219320 3524 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
Hmgb3O54879 Gm43185-201ENSMUST00000197507 2775 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Hmgb3O54879 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Hmgb3O54879 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm45129-201ENSMUST00000208444 2224 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb3O54879 Mir683-2-201ENSMUST00000102099 109 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Hmgb3O54879 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm15828-201ENSMUST00000119911 522 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm14516-201ENSMUST00000120012 252 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm12752-201ENSMUST00000121657 811 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm13232-201ENSMUST00000121816 632 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb3O54879 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm23903-201ENSMUST00000157566 131 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Ear-ps9-201ENSMUST00000161963 460 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Mir3058-201ENSMUST00000175126 91 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Mir683-1-201ENSMUST00000179371 109 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm8614-201ENSMUST00000182528 978 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm37609-201ENSMUST00000191778 678 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm36998-201ENSMUST00000193205 704 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb3O54879 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm43748-201ENSMUST00000202329 1233 ntBASIC3.97□□□□□ -1.77
Hmgb3O54879 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Hmgb3O54879 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms