Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Gm12189-201ENSMUST00000119779 912 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm24217-201ENSMUST00000158260 133 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm16456-201ENSMUST00000174431 920 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm25534-201ENSMUST00000175365 125 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Bhlhe40O35185 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Bhlhe40O35185 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm9687-201ENSMUST00000189312 602 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm28567-201ENSMUST00000190270 693 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm37884-201ENSMUST00000191857 818 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm38011-201ENSMUST00000193312 279 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm37044-201ENSMUST00000193531 693 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm38369-201ENSMUST00000195101 693 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm43136-201ENSMUST00000200403 636 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm44259-201ENSMUST00000204996 298 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm45845-201ENSMUST00000207326 582 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm29785-201ENSMUST00000217033 383 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.94□□□□□ -1.62
Bhlhe40O35185 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Bhlhe40O35185 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm13333-201ENSMUST00000119424 781 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm15390-201ENSMUST00000120323 738 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm15480-201ENSMUST00000120442 519 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm13149-201ENSMUST00000122071 339 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm17081-201ENSMUST00000167363 478 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm5777-201ENSMUST00000177265 448 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm2147-201ENSMUST00000193588 639 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm20056-201ENSMUST00000194813 519 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 AV026068-237ENSMUST00000226075 572 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm22220-201ENSMUST00000082671 149 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm43386-201ENSMUST00000199654 4001 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.93□□□□□ -1.62
Bhlhe40O35185 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Bhlhe40O35185 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Bhlhe40O35185 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.92□□□□□ -1.62
Bhlhe40O35185 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Bhlhe40O35185 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Bhlhe40O35185 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Bhlhe40O35185 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC4.92□□□□□ -1.62
Bhlhe40O35185 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Bhlhe40O35185 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.92□□□□□ -1.62
Bhlhe40O35185 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.92□□□□□ -1.62
Bhlhe40O35185 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Bhlhe40O35185 Gm14560-201ENSMUST00000118672 375 ntBASIC4.92□□□□□ -1.62
Bhlhe40O35185 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Bhlhe40O35185 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Bhlhe40O35185 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Bhlhe40O35185 Gm22312-201ENSMUST00000158005 130 ntBASIC4.92□□□□□ -1.62
Bhlhe40O35185 Gm23115-201ENSMUST00000158480 108 ntBASIC4.92□□□□□ -1.62
Bhlhe40O35185 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC4.92□□□□□ -1.62
Bhlhe40O35185 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms