Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm16566-201ENSMUST00000160387 910 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm7609-204ENSMUST00000161424 461 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm19231-201ENSMUST00000193212 830 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm43794-201ENSMUST00000200971 692 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm44281-201ENSMUST00000203090 166 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm45215-201ENSMUST00000206407 395 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 AC131997.2-201ENSMUST00000227452 362 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 AC123658.1-201ENSMUST00000228364 867 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Rybp-ps-201ENSMUST00000069489 681 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC4.9□□□□□ -1.63
Lima1Q9ERG0 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm11196-201ENSMUST00000119052 395 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm11631-201ENSMUST00000119220 156 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm4853-201ENSMUST00000119359 394 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm16463-201ENSMUST00000120527 721 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm14925-201ENSMUST00000120611 438 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm17014-201ENSMUST00000120765 168 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm15388-201ENSMUST00000121578 726 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm23855-201ENSMUST00000158377 135 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm22116-201ENSMUST00000158791 141 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Olfr331-202ENSMUST00000170501 957 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm21617-201ENSMUST00000188297 691 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm18952-201ENSMUST00000194471 846 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm33952-201ENSMUST00000197795 408 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm42652-201ENSMUST00000199073 614 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm2926-201ENSMUST00000205625 239 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm24763-201ENSMUST00000083688 190 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
Lima1Q9ERG0 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm24429-201ENSMUST00000104076 132 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm15971-201ENSMUST00000119372 211 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm14521-201ENSMUST00000119545 350 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm15791-201ENSMUST00000120365 319 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms