Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm14886-201ENSMUST00000117208 2629 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Zfp640-202ENSMUST00000224116 1562 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm43319-201ENSMUST00000198036 2270 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm23768-201ENSMUST00000104440 131 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm14756-201ENSMUST00000116395 240 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm12492-201ENSMUST00000117665 564 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm9311-201ENSMUST00000118042 1269 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm11708-201ENSMUST00000119530 832 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm5843-201ENSMUST00000121631 476 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm21839-201ENSMUST00000179536 378 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 S100a11-ps-201ENSMUST00000181735 306 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm8861-201ENSMUST00000196346 832 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm5288-201ENSMUST00000198323 1119 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm44910-201ENSMUST00000208451 396 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm5055-201ENSMUST00000215697 581 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm4052-201ENSMUST00000220890 451 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 AC154767.2-201ENSMUST00000224584 414 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 AC154527.1-201ENSMUST00000225809 242 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 AC132112.1-201ENSMUST00000226354 505 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm23097-201ENSMUST00000083448 105 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm22444-201ENSMUST00000093693 108 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm37911-201ENSMUST00000193099 1545 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.05□□□□□ -1.28
Trim11Q99PQ2 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm20276-201ENSMUST00000216122 2648 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm37894-201ENSMUST00000195416 2599 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm38085-201ENSMUST00000195785 3062 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm24608-201ENSMUST00000104381 136 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm14863-201ENSMUST00000119648 307 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm14515-201ENSMUST00000121327 216 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm15111-201ENSMUST00000122142 878 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm15187-201ENSMUST00000122329 264 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm13724-201ENSMUST00000122395 1155 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm12929-201ENSMUST00000122406 370 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm28560-201ENSMUST00000186091 315 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm28334-201ENSMUST00000186653 315 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm28495-201ENSMUST00000188452 315 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm28232-201ENSMUST00000188683 315 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm28843-201ENSMUST00000189198 678 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm28481-201ENSMUST00000189231 315 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm29546-201ENSMUST00000191171 678 ntBASIC7.04□□□□□ -1.28
Trim11Q99PQ2 Gm29059-201ENSMUST00000191534 315 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms