Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm38105-201ENSMUST00000192112 2621 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm11346-201ENSMUST00000118346 704 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm12466-201ENSMUST00000121199 620 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm23534-201ENSMUST00000157539 97 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm22764-201ENSMUST00000158370 92 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm23925-202ENSMUST00000188429 132 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm37490-201ENSMUST00000195566 724 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 AC183268.2-201ENSMUST00000214513 446 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 AC164618.1-201ENSMUST00000225769 592 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 AC107232.1-201ENSMUST00000227785 1503 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.54□□□□□ -1.68
Scrt1Q99M85 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Scrt1Q99M85 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 AC121844.3-201ENSMUST00000219124 1785 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm11212-201ENSMUST00000118337 618 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm14125-202ENSMUST00000120921 756 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm4852-201ENSMUST00000121202 729 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm25293-201ENSMUST00000122792 285 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm12854-201ENSMUST00000128518 297 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm23673-201ENSMUST00000157474 298 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Rab26os-201ENSMUST00000176215 477 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm29332-201ENSMUST00000190829 227 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm37659-201ENSMUST00000194574 111 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm20056-201ENSMUST00000194813 519 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 AC160031.1-201ENSMUST00000219914 522 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 AC102291.1-201ENSMUST00000227164 529 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Gm7665-201ENSMUST00000076710 297 ntBASIC4.53□□□□□ -1.68
Scrt1Q99M85 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Scrt1Q99M85 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms