Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mir7222-201ENSMUST00000183740 75 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gm37203-201ENSMUST00000191618 385 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gm36998-201ENSMUST00000193205 704 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gm29755-201ENSMUST00000196976 948 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 BX530055.1-201ENSMUST00000197285 122 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Igkv12-40-201ENSMUST00000199208 347 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gm44038-201ENSMUST00000203952 889 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gm6477-201ENSMUST00000217098 764 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 AC156950.1-201ENSMUST00000219604 456 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 AC122295.1-201ENSMUST00000223476 388 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 AC123658.1-201ENSMUST00000228364 867 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gm42729-201ENSMUST00000201770 2930 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm2099-202ENSMUST00000223310 3341 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm16205-201ENSMUST00000117720 1027 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm24687-201ENSMUST00000157758 241 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm24940-201ENSMUST00000158326 108 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm7316-201ENSMUST00000165395 445 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm25246-201ENSMUST00000175476 69 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm27460-201ENSMUST00000184213 100 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Mir7058-201ENSMUST00000184637 75 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28604-201ENSMUST00000186629 484 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28566-201ENSMUST00000186714 484 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28194-201ENSMUST00000187412 484 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28886-202ENSMUST00000187889 484 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28554-202ENSMUST00000189175 484 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm29213-202ENSMUST00000189703 484 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28851-202ENSMUST00000189757 484 ntBASIC3.95□□□□□ -1.78
Nup35Q8R4R6 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms