Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Clrn1Q8K445 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.57□□□□□ -1.52
Clrn1Q8K445 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm45061-201ENSMUST00000204395 2095 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm24434-201ENSMUST00000104081 132 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm22374-201ENSMUST00000104583 132 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm16082-201ENSMUST00000115992 377 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm12814-201ENSMUST00000117091 846 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm12677-201ENSMUST00000118668 426 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm13473-201ENSMUST00000119289 367 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm14907-201ENSMUST00000121948 854 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm24179-201ENSMUST00000158925 127 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm17137-202ENSMUST00000165729 957 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm15257-201ENSMUST00000177680 883 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm15252-201ENSMUST00000177750 883 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm15260-201ENSMUST00000179402 883 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm21399-201ENSMUST00000180210 597 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm11392-201ENSMUST00000181419 710 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Mir6411-201ENSMUST00000183556 108 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm44494-201ENSMUST00000196760 129 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm9057-201ENSMUST00000198791 296 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm30708-201ENSMUST00000202183 312 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm5990-201ENSMUST00000203126 746 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm18691-201ENSMUST00000203593 872 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm18467-201ENSMUST00000208805 434 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 AC158521.1-201ENSMUST00000225295 660 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 AC139754.2-201ENSMUST00000218037 1455 ntBASIC5.56□□□□□ -1.52
Clrn1Q8K445 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Clrn1Q8K445 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Clrn1Q8K445 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Clrn1Q8K445 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.55□□□□□ -1.52
Clrn1Q8K445 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms