Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm23233-201ENSMUST00000157301 137 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm24854-201ENSMUST00000158025 98 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm17223-201ENSMUST00000171413 481 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm16456-201ENSMUST00000174431 920 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm37741-201ENSMUST00000191768 1256 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm37719-201ENSMUST00000194615 292 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm43655-201ENSMUST00000197367 222 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm43136-201ENSMUST00000200403 636 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm44134-202ENSMUST00000204777 545 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm19880-201ENSMUST00000207731 318 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 AC140368.1-202ENSMUST00000226131 658 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Vps53Q8CCB4 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 AC168056.3-201ENSMUST00000225395 2540 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm15403-201ENSMUST00000119343 1227 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Mir1963-201ENSMUST00000158594 59 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm23819-201ENSMUST00000158744 109 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm21999-201ENSMUST00000165985 387 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm28917-201ENSMUST00000187294 237 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm28803-201ENSMUST00000190385 764 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm28766-201ENSMUST00000191086 234 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm17981-201ENSMUST00000191109 739 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm37632-201ENSMUST00000191811 1142 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm43973-201ENSMUST00000203562 210 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm18039-201ENSMUST00000217816 728 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 AC121542.1-201ENSMUST00000227245 721 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 AC131100.2-201ENSMUST00000227701 998 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.32□□□□□ -1.4
Vps53Q8CCB4 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Vps53Q8CCB4 Gm37456-201ENSMUST00000193176 5837 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm25422-201ENSMUST00000104219 129 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms