Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 AC164567.4-201ENSMUST00000219708 483 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 AC153153.2-201ENSMUST00000223572 411 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 AC124729.1-202ENSMUST00000225587 938 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 AC154738.1-201ENSMUST00000227054 368 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 AC112972.1-201ENSMUST00000227329 365 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Olfr878-201ENSMUST00000086061 1065 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 AC116726.1-201ENSMUST00000215028 3497 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm43175-201ENSMUST00000198450 3810 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm43361-201ENSMUST00000196562 4690 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm38189-201ENSMUST00000194495 1457 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm5583-201ENSMUST00000174328 1519 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm46199-201ENSMUST00000220373 1693 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm14554-201ENSMUST00000119548 661 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 n-R5s24-201ENSMUST00000122518 117 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm23965-201ENSMUST00000157969 142 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm25557-201ENSMUST00000158084 315 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Mir3062-201ENSMUST00000174986 105 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm8919-201ENSMUST00000182028 1014 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 AC134864.1-201ENSMUST00000226326 511 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 AC132317.2-201ENSMUST00000227301 519 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm24623-201ENSMUST00000082616 194 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm23508-201ENSMUST00000083079 72 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Mir31-201ENSMUST00000083474 106 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
Usp40Q8BWR4 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm17791-201ENSMUST00000185660 1501 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm37685-201ENSMUST00000193507 2177 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm37142-201ENSMUST00000193718 3110 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm26377-201ENSMUST00000102184 108 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm14751-201ENSMUST00000117693 222 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm11550-201ENSMUST00000118210 699 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm11617-201ENSMUST00000119609 639 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm14800-201ENSMUST00000122084 1272 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm23046-201ENSMUST00000158369 284 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm28060-201ENSMUST00000191554 189 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Trbv28-201ENSMUST00000192804 264 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm43810-201ENSMUST00000201018 232 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm43232-201ENSMUST00000201346 364 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm5176-201ENSMUST00000218244 1227 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 AC079644.3-201ENSMUST00000222452 357 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Gm18247-201ENSMUST00000222937 601 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 AC140210.1-201ENSMUST00000224961 534 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 AC107453.2-201ENSMUST00000227714 655 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Usp40Q8BWR4 n-R5s62-201ENSMUST00000082780 96 ntBASIC7.47□□□□□ -1.21
Usp40Q8BWR4 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms