Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm10936-201ENSMUST00000105264 252 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm11859-201ENSMUST00000118099 455 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm13865-201ENSMUST00000120957 865 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm15111-201ENSMUST00000122142 878 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm23885-201ENSMUST00000122682 294 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm23674-201ENSMUST00000157473 131 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm23205-201ENSMUST00000158671 103 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm7316-201ENSMUST00000165395 445 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm9556-201ENSMUST00000182938 940 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm28560-201ENSMUST00000186091 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm28334-201ENSMUST00000186653 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm28495-201ENSMUST00000188452 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm28232-201ENSMUST00000188683 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm28481-201ENSMUST00000189231 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm29059-201ENSMUST00000191534 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm37661-201ENSMUST00000191863 1550 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm37765-201ENSMUST00000192395 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm37237-201ENSMUST00000192893 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm36968-201ENSMUST00000193737 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm38290-201ENSMUST00000195238 315 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm43897-201ENSMUST00000204019 309 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Scaf4Q6PFF0 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm11462-201ENSMUST00000117749 562 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm15153-201ENSMUST00000119867 274 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm13991-201ENSMUST00000120190 648 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm11692-201ENSMUST00000122121 902 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm16362-201ENSMUST00000135189 214 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm16274-201ENSMUST00000139251 592 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm27036-201ENSMUST00000182465 980 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Mir6769b-201ENSMUST00000184793 60 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm27804-201ENSMUST00000185135 119 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm27964-201ENSMUST00000185195 62 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm28700-201ENSMUST00000187614 579 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Trbv22-201ENSMUST00000191697 291 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm36953-201ENSMUST00000195295 268 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm18805-201ENSMUST00000206872 655 ntBASIC5.94□□□□□ -1.46
Scaf4Q6PFF0 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms