Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm26079-201ENSMUST00000104066 133 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm13114-201ENSMUST00000117605 106 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm13379-201ENSMUST00000118053 621 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm8534-201ENSMUST00000118553 766 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm6664-201ENSMUST00000119138 468 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm15158-201ENSMUST00000120577 570 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm14796-201ENSMUST00000121216 959 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm12685-201ENSMUST00000121702 214 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm27024-201ENSMUST00000182561 755 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm44184-201ENSMUST00000204290 132 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm19033-201ENSMUST00000208516 964 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm45366-201ENSMUST00000209828 384 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 AC154296.2-201ENSMUST00000214696 545 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 AC154431.2-201ENSMUST00000225215 1055 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm23452-201ENSMUST00000083327 107 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 AC158981.2-201ENSMUST00000227565 1537 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm43019-201ENSMUST00000196948 2863 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Gm28667-201ENSMUST00000189873 2171 ntBASIC11.43□□□□□ -0.58
Trim41Q5NCC3 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm43750-201ENSMUST00000199027 2493 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm24173-201ENSMUST00000104130 128 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm13428-201ENSMUST00000117540 365 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm11813-201ENSMUST00000118586 291 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm11481-201ENSMUST00000120069 255 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm14775-201ENSMUST00000122089 310 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm16373-201ENSMUST00000129517 303 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm23995-201ENSMUST00000158060 129 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm28385-201ENSMUST00000185671 292 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm37609-201ENSMUST00000191778 678 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm18891-201ENSMUST00000216734 1087 ntBASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim41Q5NCC3 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm13870-201ENSMUST00000117214 1023 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm13222-201ENSMUST00000119638 138 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm14159-201ENSMUST00000119832 451 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm14238-201ENSMUST00000120227 323 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm15014-201ENSMUST00000120742 258 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm5353-201ENSMUST00000139800 793 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm22820-201ENSMUST00000157205 329 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm22361-201ENSMUST00000158435 176 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm6061-201ENSMUST00000175860 492 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm21735-201ENSMUST00000190360 696 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm20926-201ENSMUST00000194457 696 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm18327-201ENSMUST00000202426 830 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm45530-201ENSMUST00000211658 225 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 AL603745.1-201ENSMUST00000215473 532 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 AC139197.1-201ENSMUST00000228332 813 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 CT030662.3-201ENSMUST00000228751 476 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 n-R5s173-201ENSMUST00000082620 119 ntBASIC11.41□□□□□ -0.58
Trim41Q5NCC3 Gm22053-201ENSMUST00000083394 200 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms