Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm6049-201ENSMUST00000222369 458 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm19666-201ENSMUST00000198176 1893 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm22326-201ENSMUST00000158897 351 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm2497-201ENSMUST00000189539 601 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm19196-201ENSMUST00000209258 357 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Mir31-201ENSMUST00000083474 106 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.36□□□□□ -1.55
Upf3bQ3ULL6 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm12245-201ENSMUST00000117266 357 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm8202-201ENSMUST00000117682 310 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm14175-201ENSMUST00000119835 241 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm15390-201ENSMUST00000120323 738 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm11894-201ENSMUST00000121579 328 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm20561-201ENSMUST00000188131 292 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm21803-201ENSMUST00000188897 693 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm28061-201ENSMUST00000189085 807 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm28957-201ENSMUST00000190174 373 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm19617-201ENSMUST00000202977 308 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm9512-201ENSMUST00000223112 497 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Upf3bQ3ULL6 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm9923-201ENSMUST00000217785 1836 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms