Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.6□□□□□ -1.51
Usp39Q3TIX9 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Gm6863-201ENSMUST00000052882 636 ntBASIC5.6□□□□□ -1.51
Usp39Q3TIX9 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Gm23970-201ENSMUST00000083319 107 ntBASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Usp39Q3TIX9 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Mir700-201ENSMUST00000102169 79 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Mir582-201ENSMUST00000103758 81 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm9427-201ENSMUST00000116187 651 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm15073-201ENSMUST00000117432 634 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm11227-201ENSMUST00000119774 471 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm14563-201ENSMUST00000120571 354 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm15116-201ENSMUST00000122248 663 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm3757-201ENSMUST00000125878 675 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm22690-201ENSMUST00000175054 110 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm6472-201ENSMUST00000178147 651 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Mir6992-201ENSMUST00000183342 109 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm27315-201ENSMUST00000183977 154 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm35013-201ENSMUST00000197218 832 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm19104-201ENSMUST00000198392 679 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm44360-201ENSMUST00000200081 82 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm45185-201ENSMUST00000207556 404 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 AC161586.1-201ENSMUST00000223232 547 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Usp39Q3TIX9 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Usp39Q3TIX9 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.59□□□□□ -1.52
Usp39Q3TIX9 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.59□□□□□ -1.52
Usp39Q3TIX9 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.59□□□□□ -1.52
Usp39Q3TIX9 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp39Q3TIX9 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.58□□□□□ -1.52
Usp39Q3TIX9 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms