Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm37152-201ENSMUST00000193369 1175 ntBASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm38234-201ENSMUST00000195204 421 ntBASIC8.09□□□□□ -1.11
Col17a1Q07563 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.09□□□□□ -1.11
Col17a1Q07563 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC8.09□□□□□ -1.11
Col17a1Q07563 AC154305.3-201ENSMUST00000224661 552 ntBASIC8.09□□□□□ -1.11
Col17a1Q07563 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm10042-201ENSMUST00000079884 78 ntBASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm23464-201ENSMUST00000083145 147 ntBASIC8.09□□□□□ -1.11
Col17a1Q07563 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col17a1Q07563 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.09□□□□□ -1.11
Col17a1Q07563 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm42598-201ENSMUST00000200110 2437 ntBASIC8.09□□□□□ -1.12
Col17a1Q07563 AC116726.1-201ENSMUST00000215028 3497 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col17a1Q07563 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm44535-201ENSMUST00000208889 3136 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm6461-201ENSMUST00000120015 633 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm14515-201ENSMUST00000121327 216 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm25843-201ENSMUST00000122582 314 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm25572-201ENSMUST00000157527 172 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm20519-201ENSMUST00000173684 359 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm20549-201ENSMUST00000174804 429 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm4526-201ENSMUST00000186039 920 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm37241-201ENSMUST00000191736 523 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm7449-201ENSMUST00000194393 663 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm38154-201ENSMUST00000195444 340 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC8.08□□□□□ -1.12
Col17a1Q07563 AC121804.1-201ENSMUST00000221016 394 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm11360-201ENSMUST00000221898 262 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 AC161252.2-201ENSMUST00000224978 374 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 AC146601.1-201ENSMUST00000227910 905 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 AC131667.1-201ENSMUST00000214665 2175 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col17a1Q07563 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col17a1Q07563 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col17a1Q07563 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm42551-201ENSMUST00000197701 1573 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Gm43843-201ENSMUST00000202396 1587 ntBASIC8.08□□□□□ -1.12
Col17a1Q07563 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC8.07□□□□□ -1.12
Col17a1Q07563 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.07□□□□□ -1.12
Col17a1Q07563 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm12026-201ENSMUST00000120961 1024 ntBASIC8.07□□□□□ -1.12
Col17a1Q07563 Mup-ps15-201ENSMUST00000121741 539 ntBASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm6650-201ENSMUST00000166710 614 ntBASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm28304-201ENSMUST00000185977 312 ntBASIC8.07□□□□□ -1.12
Col17a1Q07563 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC8.07□□□□□ -1.12
Col17a1Q07563 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm29256-201ENSMUST00000189094 312 ntBASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm28484-201ENSMUST00000190606 312 ntBASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm19030-201ENSMUST00000194947 552 ntBASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC8.07□□□□□ -1.12
Col17a1Q07563 AC129219.1-201ENSMUST00000224336 448 ntBASIC8.07□□□□□ -1.12
Col17a1Q07563 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col17a1Q07563 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Col17a1Q07563 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Col17a1Q07563 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Col17a1Q07563 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
Col17a1Q07563 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC8.07□□□□□ -1.12
Col17a1Q07563 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC8.07□□□□□ -1.12
Col17a1Q07563 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Col17a1Q07563 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC8.07□□□□□ -1.12
Col17a1Q07563 AC158981.2-201ENSMUST00000227565 1537 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms