Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC5.35□□□□□ -1.55
Col8a1Q00780 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Col8a1Q00780 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 AC115891.1-201ENSMUST00000215798 1755 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm38387-201ENSMUST00000191945 2577 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm12520-201ENSMUST00000117493 316 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm15021-201ENSMUST00000117832 742 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm12268-201ENSMUST00000118398 442 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm15621-201ENSMUST00000119162 364 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm13743-201ENSMUST00000121486 724 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm24628-201ENSMUST00000122761 289 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm22452-201ENSMUST00000122804 104 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm16274-201ENSMUST00000139251 592 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm25152-201ENSMUST00000157117 114 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm24225-201ENSMUST00000158825 98 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm7335-201ENSMUST00000172475 373 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Trbv22-201ENSMUST00000191697 291 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm8860-201ENSMUST00000193160 445 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm20926-201ENSMUST00000194457 696 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm45473-201ENSMUST00000211452 616 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm18729-201ENSMUST00000217230 621 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm9315-201ENSMUST00000222696 908 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Col8a1Q00780 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.34□□□□□ -1.55
Col8a1Q00780 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Col8a1Q00780 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col8a1Q00780 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col8a1Q00780 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.34□□□□□ -1.56
Col8a1Q00780 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Col8a1Q00780 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.34□□□□□ -1.56
Col8a1Q00780 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Col8a1Q00780 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Col8a1Q00780 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.33□□□□□ -1.56
Col8a1Q00780 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Col8a1Q00780 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Col8a1Q00780 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Col8a1Q00780 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms