Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm23294-201ENSMUST00000104150 164 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Gm15364-201ENSMUST00000119618 585 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr713-201ENSMUST00000098139 975 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm37779-201ENSMUST00000194221 3380 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm23789-201ENSMUST00000122536 301 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm25999-201ENSMUST00000175398 133 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Spin2g-201ENSMUST00000178425 687 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Gm28195-201ENSMUST00000186992 372 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm19134-201ENSMUST00000221203 487 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Gm37181-201ENSMUST00000192513 1727 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PrkdcP97313 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
PrkdcP97313 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm44171-201ENSMUST00000203701 2109 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 AC131667.1-201ENSMUST00000214665 2175 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PrkdcP97313 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm16259-201ENSMUST00000145241 553 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Gm4845-201ENSMUST00000179202 562 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Gm19774-201ENSMUST00000190667 114 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm45171-201ENSMUST00000206360 736 ntBASIC3.32□□□□□ -1.88
PrkdcP97313 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
PrkdcP97313 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PrkdcP97313 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
PrkdcP97313 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PrkdcP97313 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 n-R5s61-201ENSMUST00000122711 118 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Gm27818-201ENSMUST00000184536 159 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Gm18403-201ENSMUST00000192907 529 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm5548-201ENSMUST00000055878 397 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Desi2-202ENSMUST00000069568 1193 ntBASIC3.31□□□□□ -1.88
PrkdcP97313 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PrkdcP97313 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PrkdcP97313 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
PrkdcP97313 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms