Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SgcbP82349 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SgcbP82349 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SgcbP82349 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.47
SgcbP82349 Gm18313-201ENSMUST00000221036 1784 ntBASIC5.9□□□□□ -1.47
SgcbP82349 Gm43982-201ENSMUST00000204995 1829 ntBASIC5.9□□□□□ -1.47
SgcbP82349 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SgcbP82349 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SgcbP82349 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
SgcbP82349 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SgcbP82349 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SgcbP82349 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SgcbP82349 Gm37786-201ENSMUST00000191714 3225 ntBASIC5.89□□□□□ -1.47
SgcbP82349 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.89□□□□□ -1.47
SgcbP82349 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC5.89□□□□□ -1.47
SgcbP82349 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.89□□□□□ -1.47
SgcbP82349 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm13379-201ENSMUST00000118053 621 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm14867-201ENSMUST00000120156 866 ntBASIC5.89□□□□□ -1.47
SgcbP82349 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.89□□□□□ -1.47
SgcbP82349 Gm7855-201ENSMUST00000137737 687 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.89□□□□□ -1.47
SgcbP82349 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.89□□□□□ -1.47
SgcbP82349 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC5.89□□□□□ -1.47
SgcbP82349 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Gm24781-201ENSMUST00000157636 117 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm22158-201ENSMUST00000158411 126 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm24682-201ENSMUST00000158764 137 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm16101-201ENSMUST00000160695 430 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm16298-201ENSMUST00000161107 420 ntBASIC5.89□□□□□ -1.47
SgcbP82349 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Gm20691-201ENSMUST00000176889 333 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm23003-201ENSMUST00000179948 107 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Mir6541-201ENSMUST00000183649 110 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm27804-201ENSMUST00000185135 119 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC5.89□□□□□ -1.47
SgcbP82349 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.89□□□□□ -1.47
SgcbP82349 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.89□□□□□ -1.47
SgcbP82349 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm9504-201ENSMUST00000196322 468 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm43624-201ENSMUST00000197368 180 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Gm44856-201ENSMUST00000206639 304 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm19196-201ENSMUST00000209258 357 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm45312-201ENSMUST00000210566 311 ntBASIC5.89□□□□□ -1.47
SgcbP82349 AC154296.2-201ENSMUST00000214696 545 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC5.89□□□□□ -1.47
SgcbP82349 Gm6575-201ENSMUST00000222946 697 ntBASIC5.89□□□□□ -1.47
SgcbP82349 CT030645.2-201ENSMUST00000224321 1012 ntBASIC5.89□□□□□ -1.47
SgcbP82349 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Gm9845-201ENSMUST00000056409 598 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
SgcbP82349 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
SgcbP82349 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SgcbP82349 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Gm15681-201ENSMUST00000137501 2704 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SgcbP82349 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.89□□□□□ -1.47
SgcbP82349 Gm37283-201ENSMUST00000193111 1571 ntBASIC5.89□□□□□ -1.47
SgcbP82349 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SgcbP82349 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SgcbP82349 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
SgcbP82349 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SgcbP82349 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SgcbP82349 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
SgcbP82349 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SgcbP82349 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SgcbP82349 Gm37531-201ENSMUST00000191628 5415 ntBASIC5.88□□□□□ -1.47
SgcbP82349 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SgcbP82349 AC174797.5-201ENSMUST00000225055 1860 ntBASIC5.88□□□□□ -1.47
SgcbP82349 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.88□□□□□ -1.47
SgcbP82349 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.88□□□□□ -1.47
SgcbP82349 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SgcbP82349 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SgcbP82349 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
SgcbP82349 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SgcbP82349 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
SgcbP82349 Gm25943-201ENSMUST00000103791 90 ntBASIC5.88□□□□□ -1.47
SgcbP82349 Mir466b-7-201ENSMUST00000103804 88 ntBASIC5.88□□□□□ -1.47
SgcbP82349 Mir466b-5-201ENSMUST00000103900 88 ntBASIC5.88□□□□□ -1.47
SgcbP82349 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SgcbP82349 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SgcbP82349 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SgcbP82349 Gm12937-201ENSMUST00000118333 448 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms