Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
NcanP55066 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
NcanP55066 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.58□□□□□ -1.52
NcanP55066 Gm29161-201ENSMUST00000188250 699 ntBASIC5.58□□□□□ -1.52
NcanP55066 Gm17952-201ENSMUST00000193914 747 ntBASIC5.58□□□□□ -1.52
NcanP55066 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.58□□□□□ -1.52
NcanP55066 AC105169.1-201ENSMUST00000218912 1294 ntBASIC5.58□□□□□ -1.52
NcanP55066 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.58□□□□□ -1.52
NcanP55066 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.58□□□□□ -1.52
NcanP55066 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NcanP55066 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NcanP55066 Olfr881-201ENSMUST00000074611 948 ntBASIC5.58□□□□□ -1.52
NcanP55066 Gm6104-201ENSMUST00000078030 603 ntBASIC5.58□□□□□ -1.52
NcanP55066 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NcanP55066 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NcanP55066 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
NcanP55066 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
NcanP55066 Gm7416-201ENSMUST00000117448 1487 ntBASIC5.58□□□□□ -1.52
NcanP55066 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NcanP55066 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NcanP55066 Gm23481-201ENSMUST00000104173 131 ntBASIC5.57□□□□□ -1.52
NcanP55066 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NcanP55066 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.57□□□□□ -1.52
NcanP55066 Gm11270-201ENSMUST00000117685 471 ntBASIC5.57□□□□□ -1.52
NcanP55066 Gm13501-201ENSMUST00000118477 979 ntBASIC5.57□□□□□ -1.52
NcanP55066 Gm14046-201ENSMUST00000119389 509 ntBASIC5.57□□□□□ -1.52
NcanP55066 Gm15038-201ENSMUST00000122144 296 ntBASIC5.57□□□□□ -1.52
NcanP55066 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.57□□□□□ -1.52
NcanP55066 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.57□□□□□ -1.52
NcanP55066 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.57□□□□□ -1.52
NcanP55066 Gm18181-201ENSMUST00000190670 736 ntBASIC5.57□□□□□ -1.52
NcanP55066 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.57□□□□□ -1.52
NcanP55066 Gm37355-201ENSMUST00000193345 606 ntBASIC5.57□□□□□ -1.52
NcanP55066 Gm5842-201ENSMUST00000195073 622 ntBASIC5.57□□□□□ -1.52
NcanP55066 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Gm42983-201ENSMUST00000199879 815 ntBASIC5.57□□□□□ -1.52
NcanP55066 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.57□□□□□ -1.52
NcanP55066 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC5.57□□□□□ -1.52
NcanP55066 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.57□□□□□ -1.52
NcanP55066 Gm7093-201ENSMUST00000223004 581 ntBASIC5.57□□□□□ -1.52
NcanP55066 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NcanP55066 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.57□□□□□ -1.52
NcanP55066 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NcanP55066 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
NcanP55066 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
NcanP55066 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NcanP55066 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NcanP55066 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.57□□□□□ -1.52
NcanP55066 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NcanP55066 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
NcanP55066 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.57□□□□□ -1.52
NcanP55066 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NcanP55066 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NcanP55066 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NcanP55066 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NcanP55066 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NcanP55066 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
NcanP55066 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NcanP55066 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
NcanP55066 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.56□□□□□ -1.52
NcanP55066 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.56□□□□□ -1.52
NcanP55066 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
NcanP55066 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NcanP55066 Gm22936-201ENSMUST00000103955 126 ntBASIC5.56□□□□□ -1.52
NcanP55066 Gm23175-201ENSMUST00000104371 132 ntBASIC5.56□□□□□ -1.52
NcanP55066 Defa-ps5-201ENSMUST00000121541 279 ntBASIC5.56□□□□□ -1.52
NcanP55066 Gm25103-201ENSMUST00000122671 318 ntBASIC5.56□□□□□ -1.52
NcanP55066 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NcanP55066 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NcanP55066 Zakit-201ENSMUST00000157677 308 ntBASIC5.56□□□□□ -1.52
NcanP55066 Gm23069-201ENSMUST00000158240 311 ntBASIC5.56□□□□□ -1.52
NcanP55066 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NcanP55066 Gm6872-201ENSMUST00000165001 700 ntBASIC5.56□□□□□ -1.52
NcanP55066 Gm22177-201ENSMUST00000175002 158 ntBASIC5.56□□□□□ -1.52
NcanP55066 Gm8941-201ENSMUST00000181451 899 ntBASIC5.56□□□□□ -1.52
NcanP55066 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NcanP55066 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.56□□□□□ -1.52
NcanP55066 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.56□□□□□ -1.52
NcanP55066 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.56□□□□□ -1.52
NcanP55066 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NcanP55066 Gm26063-201ENSMUST00000083378 107 ntBASIC5.56□□□□□ -1.52
NcanP55066 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NcanP55066 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NcanP55066 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NcanP55066 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NcanP55066 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.56□□□□□ -1.52
NcanP55066 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms