Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm22491-201ENSMUST00000157190 102 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm23891-201ENSMUST00000158114 138 ntBASIC6.49□□□□□ -1.37
Sox1P53783 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm18833-201ENSMUST00000173218 862 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm20453-201ENSMUST00000173968 226 ntBASIC6.49□□□□□ -1.37
Sox1P53783 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Gm8392-201ENSMUST00000185647 835 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm28843-201ENSMUST00000189198 678 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm29546-201ENSMUST00000191171 678 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm18444-201ENSMUST00000191239 629 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm44456-201ENSMUST00000196554 89 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm29848-201ENSMUST00000203107 295 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.49□□□□□ -1.37
Sox1P53783 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.49□□□□□ -1.37
Sox1P53783 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 CT009713.9-201ENSMUST00000223604 389 ntBASIC6.49□□□□□ -1.37
Sox1P53783 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.49□□□□□ -1.37
Sox1P53783 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox1P53783 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox1P53783 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
Sox1P53783 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Sox1P53783 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox1P53783 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox1P53783 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox1P53783 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox1P53783 Gm26078-201ENSMUST00000104067 128 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm25415-201ENSMUST00000104220 132 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm22019-201ENSMUST00000104359 96 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm12386-201ENSMUST00000117380 688 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm6744-201ENSMUST00000119303 543 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.48□□□□□ -1.37
Sox1P53783 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm16362-201ENSMUST00000135189 214 ntBASIC6.48□□□□□ -1.37
Sox1P53783 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sox1P53783 Gm16259-201ENSMUST00000145241 553 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.48□□□□□ -1.37
Sox1P53783 Gm23224-201ENSMUST00000158122 271 ntBASIC6.48□□□□□ -1.37
Sox1P53783 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox1P53783 Gm5929-201ENSMUST00000166883 487 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm17030-201ENSMUST00000167016 393 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox1P53783 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox1P53783 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Sox1P53783 Gm27887-201ENSMUST00000184367 102 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sox1P53783 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.48□□□□□ -1.37
Sox1P53783 Gm28700-201ENSMUST00000187614 579 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm17981-201ENSMUST00000191109 739 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC6.48□□□□□ -1.37
Sox1P53783 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm42465-201ENSMUST00000197036 492 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm9057-201ENSMUST00000198791 296 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm43554-201ENSMUST00000199987 186 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm44989-201ENSMUST00000204749 217 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.48□□□□□ -1.37
Sox1P53783 Gm19237-201ENSMUST00000205036 1132 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Olfr1309-201ENSMUST00000207885 964 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm8911-201ENSMUST00000213986 652 ntBASIC6.48□□□□□ -1.37
Sox1P53783 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.48□□□□□ -1.37
Sox1P53783 CT025552.2-201ENSMUST00000225497 317 ntBASIC6.48□□□□□ -1.37
Sox1P53783 AV026068-231ENSMUST00000225862 482 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms