Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm11447-201ENSMUST00000118983 858 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Gm12413-201ENSMUST00000121508 312 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Gm11200-201ENSMUST00000121698 448 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
Cdx2P43241 Gm26085-201ENSMUST00000157900 116 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Gm24363-201ENSMUST00000158440 311 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx2P43241 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Cdx2P43241 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx2P43241 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx2P43241 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdx2P43241 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Gm20056-201ENSMUST00000194813 519 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Gm9655-201ENSMUST00000211321 1284 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC4.86□□□□□ -1.63
Cdx2P43241 Gm19186-201ENSMUST00000219922 333 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 AC156569.1-201ENSMUST00000222020 3841 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 AV026068-220ENSMUST00000224153 1147 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 AV026068-224ENSMUST00000224827 928 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx2P43241 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cdx2P43241 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx2P43241 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cdx2P43241 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Cdx2P43241 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx2P43241 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.86□□□□□ -1.63
Cdx2P43241 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Cdx2P43241 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx2P43241 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cdx2P43241 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Cdx2P43241 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.86□□□□□ -1.63
Cdx2P43241 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Cdx2P43241 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx2P43241 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx2P43241 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Cdx2P43241 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
Cdx2P43241 Gm5383-201ENSMUST00000121177 617 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm7840-201ENSMUST00000122086 533 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.85□□□□□ -1.63
Cdx2P43241 Gm26034-201ENSMUST00000158154 116 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx2P43241 Gm44370-201ENSMUST00000175436 112 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.85□□□□□ -1.63
Cdx2P43241 Gm37884-201ENSMUST00000191857 818 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm9442-201ENSMUST00000194242 319 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm8719-201ENSMUST00000203602 534 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm44307-201ENSMUST00000204466 764 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm44757-201ENSMUST00000206373 157 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm45608-201ENSMUST00000210948 389 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx2P43241 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx2P43241 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 AC154851.1-201ENSMUST00000221591 655 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Gm7822-201ENSMUST00000222433 581 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx2P43241 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
Cdx2P43241 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx2P43241 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx2P43241 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.85□□□□□ -1.63
Cdx2P43241 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx2P43241 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx2P43241 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx2P43241 AC125095.1-201ENSMUST00000228387 2020 ntBASIC4.85□□□□□ -1.63
Cdx2P43241 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cdx2P43241 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx2P43241 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cdx2P43241 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cdx2P43241 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Gm37127-201ENSMUST00000192924 3036 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm37485-201ENSMUST00000192326 2953 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 AC162467.3-201ENSMUST00000219716 2172 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cdx2P43241 Gm24235-201ENSMUST00000104319 129 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm23608-201ENSMUST00000104545 128 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm11486-201ENSMUST00000107322 478 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms