Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC7.17□□□□□ -1.26
Col18a1P39061 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col18a1P39061 Gm42998-201ENSMUST00000197053 2371 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col18a1P39061 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC7.16□□□□□ -1.26
Col18a1P39061 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col18a1P39061 Gm4962-201ENSMUST00000199640 2977 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm18422-202ENSMUST00000203798 2214 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm22493-201ENSMUST00000104494 132 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm12281-201ENSMUST00000119536 298 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col18a1P39061 Gm11350-201ENSMUST00000121436 870 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm14411-201ENSMUST00000121798 914 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm26424-201ENSMUST00000122530 104 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm14651-201ENSMUST00000147192 442 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm24211-201ENSMUST00000158264 107 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Ear-ps9-201ENSMUST00000161963 460 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Col18a1P39061 Gm29600-201ENSMUST00000188687 377 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm38214-201ENSMUST00000192581 988 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm37993-201ENSMUST00000195301 988 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm37614-201ENSMUST00000195645 210 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm42459-201ENSMUST00000199679 742 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 AC156832.3-201ENSMUST00000215591 435 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 AC121804.1-201ENSMUST00000221016 394 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Gm18618-201ENSMUST00000222211 473 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 AC183096.1-201ENSMUST00000226392 130 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col18a1P39061 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col18a1P39061 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col18a1P39061 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col18a1P39061 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col18a1P39061 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
Col18a1P39061 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col18a1P39061 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC7.16□□□□□ -1.26
Col18a1P39061 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col18a1P39061 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col18a1P39061 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col18a1P39061 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC7.16□□□□□ -1.26
Col18a1P39061 Gm7529-201ENSMUST00000213753 1897 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC7.16□□□□□ -1.26
Col18a1P39061 Gm20300-201ENSMUST00000214634 3440 ntBASIC7.16□□□□□ -1.26
Col18a1P39061 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
Col18a1P39061 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col18a1P39061 Gm24170-201ENSMUST00000104124 133 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col18a1P39061 Gm8145-201ENSMUST00000118220 745 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Gm15381-201ENSMUST00000121501 1156 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Zakit-201ENSMUST00000157677 308 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Gm20543-201ENSMUST00000174200 726 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Gm26194-201ENSMUST00000175036 71 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Mir3620-201ENSMUST00000184710 61 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Gm38061-201ENSMUST00000192490 365 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col18a1P39061 Gm44282-201ENSMUST00000203199 190 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Gm32453-201ENSMUST00000204183 456 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Gm44074-201ENSMUST00000204562 337 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC7.15□□□□□ -1.26
Col18a1P39061 Gm3816-201ENSMUST00000209803 433 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Gm7099-201ENSMUST00000080066 554 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC7.15□□□□□ -1.26
Col18a1P39061 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Col18a1P39061 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Col18a1P39061 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col18a1P39061 Gm29084-201ENSMUST00000185587 1452 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col18a1P39061 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col18a1P39061 Fam26d-202ENSMUST00000218239 3075 ntBASIC7.15□□□□□ -1.26
Col18a1P39061 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Col18a1P39061 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.27
Col18a1P39061 Gm25773-201ENSMUST00000116718 127 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Gm11822-201ENSMUST00000119177 415 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Gm12850-201ENSMUST00000119210 436 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col18a1P39061 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC7.15□□□□□ -1.27
Col18a1P39061 Gm25348-201ENSMUST00000158961 111 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Gm18128-201ENSMUST00000172625 511 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col18a1P39061 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col18a1P39061 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col18a1P39061 Gm2497-201ENSMUST00000189539 601 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Gm38019-201ENSMUST00000195133 380 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col18a1P39061 Gm19617-201ENSMUST00000202977 308 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC7.15□□□□□ -1.27
Col18a1P39061 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col18a1P39061 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Col18a1P39061 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col18a1P39061 n-R5s88-201ENSMUST00000083173 118 ntBASIC7.15□□□□□ -1.27
Col18a1P39061 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col18a1P39061 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC7.15□□□□□ -1.27
Col18a1P39061 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.27
Col18a1P39061 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col18a1P39061 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms