Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm6049-201ENSMUST00000222369 458 ntBASIC4.64□□□□□ -1.67
Foxa1P35582 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.64□□□□□ -1.67
Foxa1P35582 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.64□□□□□ -1.67
Foxa1P35582 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Foxa1P35582 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Foxa1P35582 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Foxa1P35582 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Foxa1P35582 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
Foxa1P35582 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Foxa1P35582 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Foxa1P35582 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Foxa1P35582 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Foxa1P35582 AC153494.1-201ENSMUST00000218664 3041 ntBASIC4.64□□□□□ -1.67
Foxa1P35582 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Foxa1P35582 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Foxa1P35582 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Foxa1P35582 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Foxa1P35582 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Foxa1P35582 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Foxa1P35582 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Foxa1P35582 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Foxa1P35582 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 Gm11970-201ENSMUST00000116105 320 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm8202-201ENSMUST00000117682 310 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm12039-201ENSMUST00000118219 180 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm14485-201ENSMUST00000119489 493 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm11790-201ENSMUST00000119569 455 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.63□□□□□ -1.67
Foxa1P35582 Gm16463-201ENSMUST00000120527 721 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.63□□□□□ -1.67
Foxa1P35582 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.63□□□□□ -1.67
Foxa1P35582 Mir6416-201ENSMUST00000183664 117 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Foxa1P35582 Gm28061-201ENSMUST00000189085 807 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm17981-201ENSMUST00000191109 739 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm2979-201ENSMUST00000193442 463 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm8999-201ENSMUST00000204951 969 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm45845-201ENSMUST00000207326 582 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.63□□□□□ -1.67
Foxa1P35582 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC4.63□□□□□ -1.67
Foxa1P35582 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Foxa1P35582 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Foxa1P35582 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
Foxa1P35582 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 AC154368.2-201ENSMUST00000222334 1724 ntBASIC4.63□□□□□ -1.67
Foxa1P35582 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Foxa1P35582 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Foxa1P35582 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Foxa1P35582 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Foxa1P35582 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Foxa1P35582 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Foxa1P35582 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.62□□□□□ -1.67
Foxa1P35582 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Foxa1P35582 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Foxa1P35582 Gm15390-201ENSMUST00000120323 738 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Gm25293-201ENSMUST00000122792 285 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.62□□□□□ -1.67
Foxa1P35582 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Foxa1P35582 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Foxa1P35582 Gm26731-201ENSMUST00000180683 543 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Foxa1P35582 Gm28186-201ENSMUST00000187447 679 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Foxa1P35582 Gm28957-201ENSMUST00000190174 373 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Foxa1P35582 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Foxa1P35582 Gm3912-203ENSMUST00000211024 367 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Foxa1P35582 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Foxa1P35582 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
Foxa1P35582 AC132121.1-201ENSMUST00000220774 332 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Gm9512-201ENSMUST00000223112 497 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 CT025552.1-201ENSMUST00000224561 521 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Foxa1P35582 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Foxa1P35582 Mir31-201ENSMUST00000083474 106 ntBASIC4.62□□□□□ -1.67
Foxa1P35582 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Foxa1P35582 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Foxa1P35582 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms