Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm8599-201ENSMUST00000193033 457 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.66□□□□□ -1.5
Col2a1P28481 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.66□□□□□ -1.5
Col2a1P28481 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Snora52-201ENSMUST00000082732 137 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col2a1P28481 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
Col2a1P28481 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.66□□□□□ -1.5
Col2a1P28481 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col2a1P28481 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col2a1P28481 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col2a1P28481 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col2a1P28481 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col2a1P28481 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col2a1P28481 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col2a1P28481 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col2a1P28481 Gm14172-201ENSMUST00000118255 644 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col2a1P28481 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.65□□□□□ -1.5
Col2a1P28481 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.65□□□□□ -1.5
Col2a1P28481 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col2a1P28481 Gm27387-201ENSMUST00000184583 116 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Gm6546-201ENSMUST00000192096 766 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Gm6051-201ENSMUST00000201529 352 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Gm4714-201ENSMUST00000203395 279 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Gm45236-201ENSMUST00000208632 229 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Gm20586-201ENSMUST00000210122 547 ntBASIC5.65□□□□□ -1.5
Col2a1P28481 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col2a1P28481 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.65□□□□□ -1.5
Col2a1P28481 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col2a1P28481 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col2a1P28481 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col2a1P28481 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col2a1P28481 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col2a1P28481 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col2a1P28481 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col2a1P28481 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.65□□□□□ -1.51
Col2a1P28481 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col2a1P28481 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col2a1P28481 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Col2a1P28481 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col2a1P28481 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm13733-201ENSMUST00000117290 535 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm12717-201ENSMUST00000118427 983 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm11631-201ENSMUST00000119220 156 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm15034-201ENSMUST00000120043 349 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.64□□□□□ -1.51
Col2a1P28481 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC5.64□□□□□ -1.51
Col2a1P28481 Mir3104-201ENSMUST00000174911 63 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Mir6410-201ENSMUST00000184204 104 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm27266-201ENSMUST00000184521 123 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm18382-201ENSMUST00000194394 582 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.64□□□□□ -1.51
Col2a1P28481 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col2a1P28481 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col2a1P28481 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Col2a1P28481 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Col2a1P28481 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.64□□□□□ -1.51
Col2a1P28481 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.64□□□□□ -1.51
Col2a1P28481 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Col2a1P28481 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col2a1P28481 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col2a1P28481 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm12583-201ENSMUST00000120677 853 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm13745-201ENSMUST00000121994 527 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm22789-201ENSMUST00000157884 130 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms