Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm23910-201ENSMUST00000104597 132 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm12293-201ENSMUST00000121898 590 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm22492-201ENSMUST00000157192 297 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm23280-201ENSMUST00000157905 139 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm22529-201ENSMUST00000158817 123 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm17711-201ENSMUST00000172028 237 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cdx1P18111 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm21399-201ENSMUST00000180210 597 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm16531-201ENSMUST00000180658 967 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm37492-201ENSMUST00000191948 376 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm37024-201ENSMUST00000192224 868 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Cdx1P18111 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm35648-201ENSMUST00000202304 475 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm2691-201ENSMUST00000203205 901 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm18689-201ENSMUST00000203969 902 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm4374-201ENSMUST00000204929 424 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.3□□□□□ -1.72
Cdx1P18111 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 AC166358.3-201ENSMUST00000221456 181 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC4.3□□□□□ -1.72
Cdx1P18111 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.3□□□□□ -1.72
Cdx1P18111 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Cdx1P18111 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
Cdx1P18111 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr881-201ENSMUST00000074611 948 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cdx1P18111 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm23677-201ENSMUST00000083156 104 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 n-R5s69-201ENSMUST00000083872 119 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cdx1P18111 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cdx1P18111 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Cdx1P18111 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Cdx1P18111 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Cdx1P18111 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cdx1P18111 Gm44586-201ENSMUST00000207166 2737 ntBASIC4.3□□□□□ -1.72
Cdx1P18111 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm7680-201ENSMUST00000216198 1348 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm11673-201ENSMUST00000117846 331 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm3943-201ENSMUST00000118606 718 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm15785-201ENSMUST00000119145 694 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm14842-201ENSMUST00000119577 269 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm16463-201ENSMUST00000120527 721 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm26350-201ENSMUST00000157531 288 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm26355-201ENSMUST00000158220 105 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm25439-201ENSMUST00000158280 131 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.29□□□□□ -1.72
Cdx1P18111 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cdx1P18111 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.29□□□□□ -1.72
Cdx1P18111 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.29□□□□□ -1.72
Cdx1P18111 Gm28118-201ENSMUST00000185957 294 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms