Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lire1P11260 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.29□□□□□ -1.56
Lire1P11260 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lire1P11260 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Mir133b-201ENSMUST00000083546 119 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Lire1P11260 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Lire1P11260 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.29□□□□□ -1.56
Lire1P11260 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.29□□□□□ -1.56
Lire1P11260 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Lire1P11260 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Gm15530-201ENSMUST00000122206 555 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.28□□□□□ -1.56
Lire1P11260 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 Gm5924-201ENSMUST00000132554 871 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Gm23959-201ENSMUST00000157208 324 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Gm26372-201ENSMUST00000157831 236 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lire1P11260 Gm20480-201ENSMUST00000173953 250 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Gm27315-201ENSMUST00000183977 154 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Gm28118-201ENSMUST00000185957 294 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 Gm28724-202ENSMUST00000194218 295 ntBASIC5.28□□□□□ -1.56
Lire1P11260 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.28□□□□□ -1.56
Lire1P11260 Gm37358-201ENSMUST00000195492 479 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Gm43828-201ENSMUST00000196890 639 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.28□□□□□ -1.56
Lire1P11260 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.28□□□□□ -1.56
Lire1P11260 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.28□□□□□ -1.56
Lire1P11260 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Lire1P11260 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lire1P11260 Mir143-201ENSMUST00000083511 63 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lire1P11260 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lire1P11260 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Lire1P11260 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Lire1P11260 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Lire1P11260 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.28□□□□□ -1.56
Lire1P11260 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Lire1P11260 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.28□□□□□ -1.56
Lire1P11260 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.27□□□□□ -1.57
Lire1P11260 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Lire1P11260 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Lire1P11260 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lire1P11260 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Lire1P11260 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Lire1P11260 Mir676-201ENSMUST00000102443 89 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
Lire1P11260 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.27□□□□□ -1.57
Lire1P11260 Gm13811-201ENSMUST00000117800 256 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Lire1P11260 Gm3943-201ENSMUST00000118606 718 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Gm13459-201ENSMUST00000121558 646 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Gm12494-201ENSMUST00000121684 521 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Lire1P11260 Gm22867-201ENSMUST00000157499 109 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Mir1945-201ENSMUST00000157919 78 ntBASIC5.27□□□□□ -1.57
Lire1P11260 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms