Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hoxd3P09027 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC5.59□□□□□ -1.52
Hoxd3P09027 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Hoxd3P09027 Gm28651-202ENSMUST00000227968 2693 ntBASIC5.59□□□□□ -1.52
Hoxd3P09027 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Hoxd3P09027 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Hoxd3P09027 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Hoxd3P09027 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm37790-201ENSMUST00000193136 3346 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm44898-201ENSMUST00000205934 2223 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Fus-202ENSMUST00000079045 2623 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm8501-201ENSMUST00000117684 432 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm11501-201ENSMUST00000118039 581 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm11268-201ENSMUST00000118347 267 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm3943-201ENSMUST00000118606 718 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm14647-201ENSMUST00000119392 680 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm15387-201ENSMUST00000120421 648 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm11343-201ENSMUST00000120579 599 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm11882-201ENSMUST00000121463 506 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm24836-201ENSMUST00000122609 108 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC5.58□□□□□ -1.52
Hoxd3P09027 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm22597-201ENSMUST00000157602 80 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm23762-201ENSMUST00000158348 106 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm16027-201ENSMUST00000161618 758 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm23139-201ENSMUST00000179454 132 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Mir6357-201ENSMUST00000184246 104 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm27985-201ENSMUST00000185112 378 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm29228-201ENSMUST00000185489 418 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm5842-201ENSMUST00000195073 622 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Igkv4-83-201ENSMUST00000196933 334 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 AC124450.1-201ENSMUST00000225569 495 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 CT025630.2-201ENSMUST00000228293 487 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm5518-201ENSMUST00000084171 648 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 AC164433.1-201ENSMUST00000226138 1544 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Hoxd3P09027 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Grik1-209ENSMUST00000227986 2942 ntBASIC5.58□□□□□ -1.52
Hoxd3P09027 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Hoxd3P09027 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Hoxd3P09027 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms