Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm15394-201ENSMUST00000119656 1308 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm7205-201ENSMUST00000196032 1323 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm8872-201ENSMUST00000197475 1341 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Hmgb3O54879 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4□□□□□ -1.77
Hmgb3O54879 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm13013-201ENSMUST00000119087 523 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm15791-201ENSMUST00000120365 319 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm12422-201ENSMUST00000121431 302 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Gm24236-201ENSMUST00000157794 134 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm23224-201ENSMUST00000158122 271 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm2619-202ENSMUST00000166777 651 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm22655-201ENSMUST00000174949 96 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm23617-201ENSMUST00000175410 95 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm27887-201ENSMUST00000184367 102 ntBASIC4□□□□□ -1.77
Hmgb3O54879 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm21617-201ENSMUST00000188297 691 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Gm38384-201ENSMUST00000195413 1122 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm43315-201ENSMUST00000198120 313 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 AC137127.3-201ENSMUST00000213340 349 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Gm7439-201ENSMUST00000214053 835 ntBASIC4□□□□□ -1.77
Hmgb3O54879 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4□□□□□ -1.77
Hmgb3O54879 AC159622.1-201ENSMUST00000221004 554 ntBASIC4□□□□□ -1.77
Hmgb3O54879 CT030242.3-201ENSMUST00000221231 581 ntBASIC4□□□□□ -1.77
Hmgb3O54879 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC4□□□□□ -1.77
Hmgb3O54879 AC107711.2-203ENSMUST00000227827 762 ntBASIC4□□□□□ -1.77
Hmgb3O54879 AC123665.4-201ENSMUST00000228790 249 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm10108-201ENSMUST00000078246 319 ntBASIC4□□□□□ -1.77
Hmgb3O54879 n-R5s167-201ENSMUST00000083227 121 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4□□□□□ -1.77
Hmgb3O54879 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Hmgb3O54879 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hmgb3O54879 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm44248-201ENSMUST00000203079 1549 ntBASIC4□□□□□ -1.77
Hmgb3O54879 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC4□□□□□ -1.77
Hmgb3O54879 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Hmgb3O54879 Gm37733-201ENSMUST00000195478 2962 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm37814-201ENSMUST00000195820 3644 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 AC136019.1-201ENSMUST00000226503 1412 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm24709-201ENSMUST00000104123 132 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm5073-201ENSMUST00000118222 820 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm11848-201ENSMUST00000121207 973 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm26372-201ENSMUST00000157831 236 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm23662-201ENSMUST00000158046 111 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm23386-201ENSMUST00000158585 144 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm24664-201ENSMUST00000158939 100 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm28389-201ENSMUST00000190090 697 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm20770-201ENSMUST00000193474 694 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Hmgb3O54879 AC099760.1-201ENSMUST00000196300 153 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm44281-201ENSMUST00000203090 166 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm32536-201ENSMUST00000205209 445 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm45249-201ENSMUST00000211021 348 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Gm46223-201ENSMUST00000215196 675 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 AC154840.1-201ENSMUST00000225216 408 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 CT030662.2-201ENSMUST00000226942 805 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 AC131997.2-201ENSMUST00000227452 362 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 AC163646.1-201ENSMUST00000227704 397 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 AC123658.1-201ENSMUST00000228364 867 ntBASIC3.99□□□□□ -1.77
Hmgb3O54879 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Hmgb3O54879 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Hmgb3O54879 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms