Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm24166-201ENSMUST00000082724 135 ntBASIC9.15□□□□□ -0.94
Ccdc180J3QNE4 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Ccdc180J3QNE4 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Ccdc180J3QNE4 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ccdc180J3QNE4 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Ccdc180J3QNE4 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Ccdc180J3QNE4 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Fam107b-209ENSMUST00000226435 3602 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Gm25665-201ENSMUST00000157695 110 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Gm27286-201ENSMUST00000184934 179 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Gm18382-201ENSMUST00000194394 582 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 AC158633.1-201ENSMUST00000219892 649 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Snora52-201ENSMUST00000082732 137 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Gm19136-201ENSMUST00000190706 2067 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Gm43843-201ENSMUST00000202396 1587 ntBASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ccdc180J3QNE4 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm14563-201ENSMUST00000120571 354 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm13808-201ENSMUST00000121353 184 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm26085-201ENSMUST00000157900 116 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm3091-201ENSMUST00000163408 484 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm37890-201ENSMUST00000195610 3992 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm43577-201ENSMUST00000197090 3344 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Igkv11-106-201ENSMUST00000103331 346 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm5372-201ENSMUST00000187540 409 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Stk-ps2-204ENSMUST00000187808 616 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm5252-201ENSMUST00000189030 909 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 AC132384.6-201ENSMUST00000218976 1206 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 AC121804.1-201ENSMUST00000221016 394 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 AC168881.1-201ENSMUST00000226018 430 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Gm19113-201ENSMUST00000217552 1828 ntBASIC9.13□□□□□ -0.95
Ccdc180J3QNE4 Dnm3os-201ENSMUST00000139662 7928 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm37212-201ENSMUST00000192582 3650 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm45129-201ENSMUST00000208444 2224 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm42615-201ENSMUST00000197704 1820 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm9408-201ENSMUST00000197375 1505 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm10936-201ENSMUST00000105264 252 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm15185-201ENSMUST00000117397 746 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm25861-201ENSMUST00000158251 109 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm24931-201ENSMUST00000158324 107 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm4557-201ENSMUST00000185826 907 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm4526-201ENSMUST00000186039 920 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm8708-201ENSMUST00000188500 906 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 AC136146.1-201ENSMUST00000196180 91 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 CT009600.2-201ENSMUST00000226638 481 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Gm43027-201ENSMUST00000202906 3691 ntBASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Ccdc180J3QNE4 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 AC153964.1-201ENSMUST00000219677 3142 ntBASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Gm12583-201ENSMUST00000120677 853 ntBASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Gm8719-201ENSMUST00000203602 534 ntBASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 AC138284.2-201ENSMUST00000213982 567 ntBASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Gm37115-201ENSMUST00000193750 2849 ntBASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Ccdc180J3QNE4 Gm1966-201ENSMUST00000184540 7293 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms