Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm24295-201ENSMUST00000158298 131 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm5946-201ENSMUST00000182340 970 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm28017-201ENSMUST00000183434 126 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Trbv27-201ENSMUST00000193711 277 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm43315-201ENSMUST00000198120 313 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm18330-201ENSMUST00000199246 547 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm7838-201ENSMUST00000203221 1189 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Gm44795-201ENSMUST00000205496 319 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Mir449a-201ENSMUST00000083641 91 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.91□□□□□ -1.62
Trim3Q9R1R2 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim3Q9R1R2 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.9□□□□□ -1.62
Trim3Q9R1R2 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.9□□□□□ -1.62
Trim3Q9R1R2 Gm37488-201ENSMUST00000195434 3374 ntBASIC4.9□□□□□ -1.62
Trim3Q9R1R2 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.9□□□□□ -1.62
Trim3Q9R1R2 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trim3Q9R1R2 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.9□□□□□ -1.62
Trim3Q9R1R2 Gm20667-201ENSMUST00000175674 1930 ntBASIC4.9□□□□□ -1.62
Trim3Q9R1R2 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.9□□□□□ -1.62
Trim3Q9R1R2 Gm25758-201ENSMUST00000103987 129 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm14601-201ENSMUST00000120892 236 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm12413-201ENSMUST00000121508 312 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm22895-201ENSMUST00000157508 308 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm22530-201ENSMUST00000158820 118 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Mir3110-201ENSMUST00000175053 80 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm42579-201ENSMUST00000200512 734 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm7688-201ENSMUST00000212857 337 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm6906-201ENSMUST00000218014 569 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 AC162467.1-201ENSMUST00000220254 621 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 AV026068-231ENSMUST00000225862 482 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm22456-201ENSMUST00000082578 125 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm23302-201ENSMUST00000082710 100 ntBASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trim3Q9R1R2 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm11781-201ENSMUST00000118328 472 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm11742-201ENSMUST00000119903 233 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm11278-201ENSMUST00000121002 997 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm6027-201ENSMUST00000121467 756 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm11804-201ENSMUST00000121663 468 ntBASIC4.89□□□□□ -1.63
Trim3Q9R1R2 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms