Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Rsph3bQ9DA80 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Rsph3bQ9DA80 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Rsph3bQ9DA80 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm24160-201ENSMUST00000104594 126 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm15560-201ENSMUST00000117107 643 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm12317-201ENSMUST00000122307 319 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm26310-201ENSMUST00000157766 117 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm23964-201ENSMUST00000157966 107 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm18117-201ENSMUST00000187720 742 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm37700-201ENSMUST00000192617 965 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm2645-201ENSMUST00000223516 547 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm23796-201ENSMUST00000084011 160 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rsph3bQ9DA80 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm24235-201ENSMUST00000104319 129 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm12641-201ENSMUST00000117874 985 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm12985-201ENSMUST00000118376 183 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm13213-201ENSMUST00000119668 474 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm11909-201ENSMUST00000121424 759 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm22870-201ENSMUST00000157501 112 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm24685-201ENSMUST00000157764 285 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm26312-201ENSMUST00000157769 165 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm23115-201ENSMUST00000158480 108 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm28149-201ENSMUST00000187102 378 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm28768-201ENSMUST00000189034 378 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm28769-201ENSMUST00000190176 615 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.61□□□□□ -1.51
Rsph3bQ9DA80 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms