Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mir7087-201ENSMUST00000184840 70 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm6075-201ENSMUST00000186816 486 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm38150-201ENSMUST00000192996 452 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm44523-201ENSMUST00000205616 417 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 AC122301.1-201ENSMUST00000219625 507 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 AC122858.1-201ENSMUST00000226212 433 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 AC122858.3-201ENSMUST00000226341 740 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 AC154618.1-201ENSMUST00000227451 303 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 AC122858.1-202ENSMUST00000228290 986 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 AC138765.1-201ENSMUST00000228657 385 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm5045-201ENSMUST00000027054 810 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 n-R5s167-201ENSMUST00000083227 121 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm22155-201ENSMUST00000083836 162 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm17131-201ENSMUST00000164420 3846 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm29084-201ENSMUST00000185587 1452 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Nup35Q8R4R6 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm2987-201ENSMUST00000187673 1693 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm37180-201ENSMUST00000195335 2819 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 AC147639.2-202ENSMUST00000224834 1545 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm8202-201ENSMUST00000117682 310 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm12423-201ENSMUST00000118334 135 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm15490-201ENSMUST00000119894 387 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm15803-201ENSMUST00000120118 394 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm15390-201ENSMUST00000120323 738 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm6031-201ENSMUST00000121314 1054 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm13232-201ENSMUST00000121816 632 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm16259-201ENSMUST00000145241 553 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm24065-201ENSMUST00000157487 264 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm24295-201ENSMUST00000158298 131 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Mir3058-201ENSMUST00000175126 91 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm38181-201ENSMUST00000181357 720 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm5066-201ENSMUST00000188479 822 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm8039-201ENSMUST00000204758 712 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm45157-201ENSMUST00000208729 401 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm4587-201ENSMUST00000209135 637 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 AC161586.1-201ENSMUST00000223232 547 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm6177-201ENSMUST00000085589 465 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm42841-201ENSMUST00000199806 1932 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm42842-201ENSMUST00000197736 3004 ntBASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC3.97□□□□□ -1.77
Nup35Q8R4R6 Gm16332-201ENSMUST00000134229 2967 ntBASIC3.96□□□□□ -1.77
Nup35Q8R4R6 Gm20342-201ENSMUST00000185480 9720 ntBASIC3.96□□□□□ -1.77
Nup35Q8R4R6 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gm16149-201ENSMUST00000117631 309 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Nup35Q8R4R6 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms