Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm22361-201ENSMUST00000158435 176 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm26404-201ENSMUST00000158498 109 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm24957-201ENSMUST00000179604 132 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm18183-201ENSMUST00000191024 615 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm5285-201ENSMUST00000193089 666 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm37191-201ENSMUST00000193346 388 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm37235-201ENSMUST00000195171 59 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm42983-201ENSMUST00000199879 815 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm44239-201ENSMUST00000204228 271 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm30646-201ENSMUST00000207662 180 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm3213-201ENSMUST00000219296 441 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr467-201ENSMUST00000084756 927 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.04□□□□□ -1.6
Ccdc28bQ8CEG5 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm26143-201ENSMUST00000104480 108 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm25430-201ENSMUST00000157614 289 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm22724-201ENSMUST00000158091 127 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm22698-201ENSMUST00000175375 108 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm22254-201ENSMUST00000179186 110 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm27818-201ENSMUST00000184536 159 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm20561-201ENSMUST00000188131 292 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm29148-201ENSMUST00000188140 336 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm37189-201ENSMUST00000192131 298 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm412-201ENSMUST00000193360 948 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Gm37308-201ENSMUST00000194684 100 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Mir338-201ENSMUST00000083666 98 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.03□□□□□ -1.6
Ccdc28bQ8CEG5 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc28bQ8CEG5 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms