Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm19095-201ENSMUST00000220533 730 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm11360-201ENSMUST00000221898 262 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 AC151902.1-201ENSMUST00000227800 375 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm24706-201ENSMUST00000082806 137 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Gm3962-201ENSMUST00000173027 2587 ntBASIC6.07□□□□□ -1.44
Nup88Q8CEC0 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 AC163296.2-201ENSMUST00000220177 1315 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm15772-201ENSMUST00000118533 438 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 n-R5s21-201ENSMUST00000122692 117 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm23897-201ENSMUST00000158110 158 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Scarna13-201ENSMUST00000158164 275 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm27543-201ENSMUST00000183562 177 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Mir6400-201ENSMUST00000184870 92 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm2950-201ENSMUST00000185530 520 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm2979-201ENSMUST00000193442 463 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Mir409-201ENSMUST00000198153 79 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm43794-201ENSMUST00000200971 692 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm20946-201ENSMUST00000212367 461 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm4822-201ENSMUST00000077551 479 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm44027-201ENSMUST00000203419 3480 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Gm18719-201ENSMUST00000196696 1413 ntBASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nup88Q8CEC0 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm23593-201ENSMUST00000104309 120 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm14610-201ENSMUST00000118358 966 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm15981-201ENSMUST00000119196 457 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm25176-201ENSMUST00000122640 125 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm22214-201ENSMUST00000157563 172 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm26312-201ENSMUST00000157769 165 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm25019-201ENSMUST00000179732 110 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm28567-201ENSMUST00000190270 693 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm34176-201ENSMUST00000192621 474 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm37044-201ENSMUST00000193531 693 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm38369-201ENSMUST00000195101 693 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm37445-201ENSMUST00000195318 242 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm43631-201ENSMUST00000202011 369 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm45215-201ENSMUST00000206407 395 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm4290-201ENSMUST00000206897 814 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm44820-201ENSMUST00000207420 396 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm22456-201ENSMUST00000082578 125 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 CT025710.1-201ENSMUST00000222949 2533 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nup88Q8CEC0 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms