Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm3084-201ENSMUST00000169967 598 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm28116-201ENSMUST00000189064 387 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm37878-201ENSMUST00000192108 387 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm17951-201ENSMUST00000198536 496 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm44237-201ENSMUST00000205183 936 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Snord22-201ENSMUST00000083153 126 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm8700-201ENSMUST00000222187 3054 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm42510-201ENSMUST00000196470 2258 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm15779-201ENSMUST00000117470 412 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm24745-201ENSMUST00000157840 85 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm22211-201ENSMUST00000158097 156 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm27760-201ENSMUST00000185048 114 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm18601-201ENSMUST00000220831 634 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.48□□□□□ -1.69
Col6a6Q8C6K9 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm14304-201ENSMUST00000117272 446 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm11699-201ENSMUST00000119016 401 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Mir7022-201ENSMUST00000183749 61 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm24031-201ENSMUST00000083930 131 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 AC125095.1-201ENSMUST00000228387 2020 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Mir761-201ENSMUST00000103245 76 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm22119-201ENSMUST00000175594 99 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Mir6391-201ENSMUST00000184391 104 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm37581-201ENSMUST00000192371 988 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm32453-201ENSMUST00000204183 456 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm6828-201ENSMUST00000207902 1186 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 AC121947.1-201ENSMUST00000221755 1145 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.47□□□□□ -1.69
Col6a6Q8C6K9 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.46□□□□□ -1.69
Col6a6Q8C6K9 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.46□□□□□ -1.69
Col6a6Q8C6K9 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Col6a6Q8C6K9 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Gm11486-201ENSMUST00000107322 478 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Gm15603-201ENSMUST00000119252 492 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Gm13867-201ENSMUST00000120844 395 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Gm15227-201ENSMUST00000121844 399 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 AC159896.3-201ENSMUST00000215904 3835 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 AC132315.1-201ENSMUST00000221771 390 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Anxa13-202ENSMUST00000227274 1201 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 AC107232.1-201ENSMUST00000227785 1503 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Gm19084-201ENSMUST00000222939 1762 ntBASIC4.46□□□□□ -1.7
Col6a6Q8C6K9 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms