Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm28677-202ENSMUST00000186904 615 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm36961-201ENSMUST00000191980 132 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Igkv8-22-201ENSMUST00000199501 367 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm34091-201ENSMUST00000200875 604 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm8575-201ENSMUST00000210262 521 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm18904-201ENSMUST00000218756 329 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm5955-201ENSMUST00000222712 219 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 AC161374.2-201ENSMUST00000223662 596 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm23722-201ENSMUST00000083002 130 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Snora57-201ENSMUST00000093658 148 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 4930466I24Rik-201ENSMUST00000144105 2264 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm28451-201ENSMUST00000189311 2560 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm44667-201ENSMUST00000207632 3337 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Rpap2-203ENSMUST00000112651 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Trim42-201ENSMUST00000035026 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm44001-201ENSMUST00000203158 3773 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm37159-201ENSMUST00000192720 3605 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm9776-201ENSMUST00000059598 2980 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Duxbl1-203ENSMUST00000172667 2209 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm11241-201ENSMUST00000117371 896 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm15037-201ENSMUST00000120358 259 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm11726-201ENSMUST00000121028 424 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm23220-201ENSMUST00000158115 137 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm17068-201ENSMUST00000163135 980 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Mir5625-201ENSMUST00000176598 80 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Mir5623-201ENSMUST00000176631 70 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm25457-201ENSMUST00000179509 107 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm19900-201ENSMUST00000207285 576 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm18060-201ENSMUST00000207407 564 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm45252-201ENSMUST00000211579 397 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 AC158803.3-201ENSMUST00000220024 211 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 AC139381.1-201ENSMUST00000224215 478 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 AC166574.2-201ENSMUST00000226751 381 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm24817-201ENSMUST00000093672 105 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Gm4149-201ENSMUST00000099371 276 ntBASIC8.24□□□□□ -1.09
Trim35Q8C006 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim35Q8C006 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim35Q8C006 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim35Q8C006 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim35Q8C006 Patj-207ENSMUST00000107034 4799 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim35Q8C006 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim35Q8C006 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms