Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Olfr1160-201ENSMUST00000099839 960 ntBASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Usp40Q8BWR4 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm13928-201ENSMUST00000120326 1732 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm24350-201ENSMUST00000104163 133 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm14607-201ENSMUST00000119119 491 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm13435-201ENSMUST00000120111 1023 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm7316-201ENSMUST00000165395 445 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm28594-201ENSMUST00000187022 661 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm28661-201ENSMUST00000188231 681 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm3496-201ENSMUST00000188283 745 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm29592-201ENSMUST00000189434 370 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Mir1892-201ENSMUST00000197752 80 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Mir409-201ENSMUST00000198153 79 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm2011-203ENSMUST00000203750 435 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm7333-201ENSMUST00000213449 1060 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 AC154198.1-201ENSMUST00000222839 424 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 AC154323.1-201ENSMUST00000228329 1231 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm4822-201ENSMUST00000077551 479 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Usp40Q8BWR4 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm37880-201ENSMUST00000192216 3257 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm17132-201ENSMUST00000109542 1158 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Mir669d-2-201ENSMUST00000116854 86 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm11406-201ENSMUST00000117418 484 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm11433-201ENSMUST00000118318 228 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 H3f3c-201ENSMUST00000119459 411 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm12685-201ENSMUST00000121702 214 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm13363-201ENSMUST00000122008 522 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Mir1898-201ENSMUST00000122643 83 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm25603-201ENSMUST00000158361 105 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm3242-201ENSMUST00000171273 485 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm20519-201ENSMUST00000173684 359 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm26607-201ENSMUST00000180661 867 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm8941-201ENSMUST00000181451 899 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm29201-201ENSMUST00000189120 431 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Gm45008-201ENSMUST00000206420 493 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC7.49□□□□□ -1.21
Usp40Q8BWR4 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Usp40Q8BWR4 AC123067.1-201ENSMUST00000217711 462 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms