Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm25434-201ENSMUST00000158278 167 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm23259-201ENSMUST00000158318 303 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm24939-201ENSMUST00000158325 137 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm23269-201ENSMUST00000178701 107 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm10410-201ENSMUST00000180138 384 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm26898-201ENSMUST00000181678 384 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm29509-201ENSMUST00000185716 321 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm29385-201ENSMUST00000186831 363 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm29490-201ENSMUST00000190923 342 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm43276-201ENSMUST00000199712 364 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44048-201ENSMUST00000204531 361 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44623-201ENSMUST00000207934 434 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm7624-201ENSMUST00000209702 435 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm8911-201ENSMUST00000213986 652 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AC132384.5-201ENSMUST00000218562 226 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AC131720.2-201ENSMUST00000220420 431 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm18601-201ENSMUST00000220831 634 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm4057-201ENSMUST00000221407 368 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AC164424.1-201ENSMUST00000221690 170 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 CT030135.1-201ENSMUST00000223760 570 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AC117237.1-201ENSMUST00000224035 395 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm6757-201ENSMUST00000189810 1706 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14733-201ENSMUST00000117680 133 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm13087-201ENSMUST00000118298 256 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm11869-201ENSMUST00000118701 329 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14018-201ENSMUST00000119042 455 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm16445-201ENSMUST00000120399 714 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm5646-201ENSMUST00000120568 714 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Mup-ps17-201ENSMUST00000120723 218 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12358-201ENSMUST00000121842 520 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm25550-201ENSMUST00000158079 128 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm23352-201ENSMUST00000158428 64 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm4152-201ENSMUST00000172675 259 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15257-201ENSMUST00000177680 883 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15252-201ENSMUST00000177750 883 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15143-201ENSMUST00000178180 714 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm5947-201ENSMUST00000179156 714 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15260-201ENSMUST00000179402 883 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm5645-201ENSMUST00000179597 714 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm27295-201ENSMUST00000184264 153 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm18849-201ENSMUST00000189861 560 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Gm28996-201ENSMUST00000190316 721 ntBASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sh3rf1Q69ZI1 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms