Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC8.36□□□□□ -1.07
Clcn1Q64347 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Clcn1Q64347 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm26422-201ENSMUST00000104276 132 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm13772-201ENSMUST00000118431 317 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm14614-201ENSMUST00000119873 384 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm9005-201ENSMUST00000119908 607 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm12155-201ENSMUST00000121267 160 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Mir1907-201ENSMUST00000122509 90 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm22569-201ENSMUST00000175545 124 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm24415-201ENSMUST00000180218 107 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm8192-201ENSMUST00000182196 958 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm28492-201ENSMUST00000190899 1019 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm37341-201ENSMUST00000194680 371 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm2040-201ENSMUST00000202979 289 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm44111-201ENSMUST00000204649 399 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm44794-201ENSMUST00000206550 411 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm44959-201ENSMUST00000209127 231 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm45366-201ENSMUST00000209828 384 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm12582-201ENSMUST00000030555 697 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 n-R5s58-201ENSMUST00000093682 119 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm37423-201ENSMUST00000194246 3342 ntBASIC8.36□□□□□ -1.07
Clcn1Q64347 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Clcn1Q64347 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.36□□□□□ -1.07
Clcn1Q64347 Gm42541-201ENSMUST00000199871 2249 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm36962-201ENSMUST00000192114 1761 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm9408-201ENSMUST00000197375 1505 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC8.35□□□□□ -1.07
Clcn1Q64347 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Clcn1Q64347 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm12630-201ENSMUST00000121575 784 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm5809-201ENSMUST00000121854 529 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm8648-201ENSMUST00000122457 221 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm4997-201ENSMUST00000154056 360 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm24729-201ENSMUST00000158225 137 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.35□□□□□ -1.07
Clcn1Q64347 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm28412-201ENSMUST00000187243 177 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm28080-201ENSMUST00000188552 722 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm21088-201ENSMUST00000190875 316 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm28724-202ENSMUST00000194218 295 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm3933-201ENSMUST00000195391 439 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm37095-201ENSMUST00000195421 205 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Igkv4-83-201ENSMUST00000196933 334 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm3148-201ENSMUST00000203594 612 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC8.35□□□□□ -1.07
Clcn1Q64347 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm18103-201ENSMUST00000216621 779 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 AC147240.1-201ENSMUST00000218767 431 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 AC140930.4-201ENSMUST00000220750 150 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC8.35□□□□□ -1.07
Clcn1Q64347 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Clcn1Q64347 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Clcn1Q64347 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Clcn1Q64347 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gm45516-201ENSMUST00000211588 4182 ntBASIC8.35□□□□□ -1.07
Clcn1Q64347 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Clcn1Q64347 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Clcn1Q64347 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Clcn1Q64347 Gm45061-201ENSMUST00000204395 2095 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms