Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm15185-201ENSMUST00000117397 746 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm16149-201ENSMUST00000117631 309 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm14125-202ENSMUST00000120921 756 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm25293-201ENSMUST00000122792 285 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm17044-201ENSMUST00000168549 828 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm7335-201ENSMUST00000172475 373 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm18698-201ENSMUST00000192327 668 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm9038-201ENSMUST00000203400 604 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm2099-201ENSMUST00000220979 412 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm23456-201ENSMUST00000083335 137 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm22741-201ENSMUST00000083438 165 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Upf3bQ3ULL6 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm15357-201ENSMUST00000119160 285 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm15022-201ENSMUST00000122074 746 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm7973-201ENSMUST00000122107 488 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm26404-201ENSMUST00000158498 109 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm24949-201ENSMUST00000183609 215 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm17981-201ENSMUST00000191109 739 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm2147-201ENSMUST00000193588 639 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm44820-201ENSMUST00000207420 396 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Upf3bQ3ULL6 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm13690-201ENSMUST00000118989 285 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm18953-201ENSMUST00000175694 300 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm18325-201ENSMUST00000203228 835 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm7825-201ENSMUST00000204046 416 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.37□□□□□ -1.55
Upf3bQ3ULL6 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms