Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm18036-201ENSMUST00000195256 272 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm20940-201ENSMUST00000197308 360 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm44330-201ENSMUST00000200106 143 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm43036-201ENSMUST00000200594 373 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm18215-201ENSMUST00000204429 798 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm25134-201ENSMUST00000082646 160 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.05□□□□□ -1.6
Trafd1Q3UDK1 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm22273-201ENSMUST00000104040 132 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm24789-201ENSMUST00000104282 131 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm9429-201ENSMUST00000117804 868 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm7657-201ENSMUST00000118851 666 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm11631-201ENSMUST00000119220 156 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm14126-201ENSMUST00000122345 395 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm25603-201ENSMUST00000158361 105 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm7609-204ENSMUST00000161424 461 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm16456-201ENSMUST00000174431 920 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm24465-201ENSMUST00000178398 107 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm27541-201ENSMUST00000184078 122 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm17981-201ENSMUST00000191109 739 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm18864-201ENSMUST00000194518 1051 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm20239-201ENSMUST00000196610 982 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm42694-201ENSMUST00000196951 358 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm20368-201ENSMUST00000220716 301 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm23927-201ENSMUST00000082466 215 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trafd1Q3UDK1 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm11409-201ENSMUST00000118621 403 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm15012-201ENSMUST00000119176 106 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm16463-201ENSMUST00000120527 721 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm14563-201ENSMUST00000120571 354 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm11805-201ENSMUST00000121238 600 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm11507-201ENSMUST00000156462 412 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm15838-201ENSMUST00000161575 180 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm20545-201ENSMUST00000174739 210 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm37882-201ENSMUST00000195254 196 ntBASIC5.03□□□□□ -1.6
Trafd1Q3UDK1 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms