Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm28567-201ENSMUST00000190270 693 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Gm37710-201ENSMUST00000193501 1274 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Gm37044-201ENSMUST00000193531 693 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Gm37088-201ENSMUST00000193887 406 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Gm38369-201ENSMUST00000195101 693 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Sox9Q04887 Gm19617-201ENSMUST00000202977 308 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Gm45912-201ENSMUST00000210646 543 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox9Q04887 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox9Q04887 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sox9Q04887 AC166358.6-201ENSMUST00000221834 1206 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.16□□□□□ -1.42
Sox9Q04887 Zfp429-203ENSMUST00000224684 524 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 CT025525.3-201ENSMUST00000228858 366 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.16□□□□□ -1.42
Sox9Q04887 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sox9Q04887 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Sox9Q04887 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Sox9Q04887 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Sox9Q04887 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Sox9Q04887 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.16□□□□□ -1.42
Sox9Q04887 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sox9Q04887 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Sox9Q04887 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Sox9Q04887 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.15□□□□□ -1.42
Sox9Q04887 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sox9Q04887 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sox9Q04887 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Sox9Q04887 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm7754-201ENSMUST00000223075 2064 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Sox9Q04887 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Gm14007-201ENSMUST00000118288 210 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm13194-201ENSMUST00000142299 311 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sox9Q04887 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm7496-201ENSMUST00000192573 1034 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Gm2053-201ENSMUST00000195671 631 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sox9Q04887 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Gm44353-201ENSMUST00000200618 138 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm45660-201ENSMUST00000210267 151 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Gm20368-201ENSMUST00000220716 301 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 AC124569.4-201ENSMUST00000223830 1220 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 AC154727.1-201ENSMUST00000226537 499 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sox9Q04887 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sox9Q04887 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm25582-201ENSMUST00000083412 110 ntBASIC6.15□□□□□ -1.42
Sox9Q04887 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Sox9Q04887 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.15□□□□□ -1.43
Sox9Q04887 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox9Q04887 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.15□□□□□ -1.43
Sox9Q04887 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Sox9Q04887 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox9Q04887 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Sox9Q04887 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.15□□□□□ -1.43
Sox9Q04887 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.15□□□□□ -1.43
Sox9Q04887 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
Sox9Q04887 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
Sox9Q04887 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.15□□□□□ -1.43
Sox9Q04887 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Sox9Q04887 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox9Q04887 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sox9Q04887 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms