Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Mir188-201ENSMUST00000083464 68 ntBASIC4.53□□□□□ -1.68
H3f3aP84244 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.53□□□□□ -1.68
H3f3aP84244 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.53□□□□□ -1.68
H3f3aP84244 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3f3aP84244 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3f3aP84244 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3f3aP84244 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3f3aP84244 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.53□□□□□ -1.68
H3f3aP84244 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.53□□□□□ -1.68
H3f3aP84244 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3f3aP84244 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3f3aP84244 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.53□□□□□ -1.68
H3f3aP84244 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
H3f3aP84244 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H3f3aP84244 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H3f3aP84244 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
H3f3aP84244 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
H3f3aP84244 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
H3f3aP84244 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H3f3aP84244 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
H3f3aP84244 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm13321-201ENSMUST00000117101 400 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Gm11550-201ENSMUST00000118210 699 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Gm15828-201ENSMUST00000119911 522 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Gm14125-202ENSMUST00000120921 756 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Gm17044-201ENSMUST00000168549 828 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Mir6343-201ENSMUST00000183584 84 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Gm18036-201ENSMUST00000195256 272 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Gm43408-201ENSMUST00000198263 440 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm20368-201ENSMUST00000220716 301 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.52□□□□□ -1.69
H3f3aP84244 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H3f3aP84244 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm44894-201ENSMUST00000205280 2174 ntBASIC4.52□□□□□ -1.69
H3f3aP84244 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H3f3aP84244 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3f3aP84244 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.52□□□□□ -1.69
H3f3aP84244 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Gm37332-201ENSMUST00000195853 2844 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
H3f3aP84244 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3f3aP84244 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
H3f3aP84244 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3f3aP84244 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
H3f3aP84244 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H3f3aP84244 Gm14756-201ENSMUST00000116395 240 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Gm14711-201ENSMUST00000117056 217 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Gm16149-201ENSMUST00000117631 309 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 H3f3c-201ENSMUST00000119459 411 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.51□□□□□ -1.69
H3f3aP84244 Gm25293-201ENSMUST00000122792 285 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H3f3aP84244 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H3f3aP84244 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
H3f3aP84244 Gm20545-201ENSMUST00000174739 210 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
H3f3aP84244 Gm28468-201ENSMUST00000188536 615 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Gm37123-201ENSMUST00000192994 1171 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
H3f3aP84244 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H3f3aP84244 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC4.51□□□□□ -1.69
H3f3aP84244 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.51□□□□□ -1.69
H3f3aP84244 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 AC132121.1-201ENSMUST00000220774 332 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Gm2099-201ENSMUST00000220979 412 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.51□□□□□ -1.69
H3f3aP84244 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.51□□□□□ -1.69
H3f3aP84244 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms