Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm18702-201ENSMUST00000196923 588 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.82□□□□□ -1.64
Cdh11P55288 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC4.82□□□□□ -1.64
Cdh11P55288 Gm43478-201ENSMUST00000200381 292 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Gm44795-201ENSMUST00000205496 319 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Gm33601-201ENSMUST00000210001 961 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Gm19174-201ENSMUST00000216944 956 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdh11P55288 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdh11P55288 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdh11P55288 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdh11P55288 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Cdh11P55288 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Gm37092-201ENSMUST00000193381 1518 ntBASIC4.82□□□□□ -1.64
Cdh11P55288 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh11P55288 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh11P55288 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.81□□□□□ -1.64
Cdh11P55288 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdh11P55288 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh11P55288 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh11P55288 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh11P55288 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdh11P55288 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm44897-201ENSMUST00000206187 1341 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh11P55288 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm19552-201ENSMUST00000194744 2833 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdh11P55288 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh11P55288 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh11P55288 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm12245-201ENSMUST00000117266 357 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm15531-201ENSMUST00000118062 252 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm14930-201ENSMUST00000118864 652 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm13887-201ENSMUST00000119009 344 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm16200-201ENSMUST00000120385 331 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm26172-201ENSMUST00000158421 134 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdh11P55288 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm17142-201ENSMUST00000164933 645 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm3216-201ENSMUST00000166927 486 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm3141-201ENSMUST00000168726 499 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh11P55288 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh11P55288 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm4207-201ENSMUST00000173144 960 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm16456-201ENSMUST00000174431 920 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm21756-201ENSMUST00000178380 930 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm21405-201ENSMUST00000179024 930 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm27855-201ENSMUST00000184122 128 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm27266-201ENSMUST00000184521 123 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm21191-201ENSMUST00000186484 930 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm29503-201ENSMUST00000191044 930 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm37996-201ENSMUST00000191859 367 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm38268-201ENSMUST00000195813 193 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
Cdh11P55288 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm44580-201ENSMUST00000206333 877 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm45185-201ENSMUST00000207556 404 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm2961-201ENSMUST00000211074 772 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm5655-201ENSMUST00000221078 901 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh11P55288 Gm6474-201ENSMUST00000223250 699 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 AC122858.1-201ENSMUST00000226212 433 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 AC122858.3-201ENSMUST00000226341 740 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 AC122858.1-202ENSMUST00000228290 986 ntBASIC4.81□□□□□ -1.64
Cdh11P55288 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms