Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nkx2-1P50220 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Nkx2-1P50220 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx2-1P50220 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 n-R5s24-201ENSMUST00000122518 117 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm25290-201ENSMUST00000122796 144 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm22655-201ENSMUST00000174949 96 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm24303-201ENSMUST00000178237 126 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm2539-203ENSMUST00000181352 746 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm27219-201ENSMUST00000184633 742 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm27653-201ENSMUST00000185037 136 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm37024-201ENSMUST00000192224 868 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm6074-201ENSMUST00000193340 451 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm31861-201ENSMUST00000204563 672 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm45525-201ENSMUST00000210800 389 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm4510-201ENSMUST00000218265 427 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm19168-201ENSMUST00000218804 1091 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm18387-201ENSMUST00000220333 702 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Mir375-201ENSMUST00000083682 64 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Nkx2-1P50220 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.36□□□□□ -1.71
Nkx2-1P50220 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm15772-201ENSMUST00000118533 438 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm13473-201ENSMUST00000119289 367 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm11742-201ENSMUST00000119903 233 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm14913-201ENSMUST00000120011 1093 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm16200-201ENSMUST00000120385 331 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm11848-201ENSMUST00000121207 973 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm8761-201ENSMUST00000121507 955 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm15141-201ENSMUST00000121860 729 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm23430-201ENSMUST00000122490 314 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm26000-201ENSMUST00000157991 107 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm22804-201ENSMUST00000158052 101 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Mir6989-201ENSMUST00000184812 65 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Mir6952-201ENSMUST00000185092 61 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm18011-201ENSMUST00000203717 565 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm44074-201ENSMUST00000204562 337 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm44768-201ENSMUST00000205719 393 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms